Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02535 ATGGGTAAGTACCTTCTGTTACTGACTCTCACTCTCCTCAATCTCGTACTATTGGCCACTCTTCAAGTCTCCGCTGCACCTTCTACTACGTCCCCTGCAAAAATTGTTAGTGGGCTTCTCTCCAATGCCATGCCTGCCTTCACCAAATGGGTGTGGTCGCTCAAGGCCACCACCAAAACGGCGGTTTCGAGCAGGTCAATGATGAAGTTCGAGGGTGGATTCAGTGTGGAGACTGTGTTCGATGGGAGCAAGCTTGGGATCGAGCCTTATGCTGTGGAGGTGTTGCCCAATGGGGAGCTTCTCATTCTTGATTCGGCTAATAGTAACATTTATAGGATTTCCTCCTCGCTTTCTTTGTACAGCAGGCCCAAGCTGGTGGCAGGGTCAGCTGAAGGGTATTCTGGACATGTTGATGGGAAGCTCAGGGAGGCTAGGATGAACCACCCAAAGGGAATAACTGTTGATGACCGAGGAAATATTTATGTTGCAGATACTACGAATATGGCAATTAGGAAAATTAGTGATTCAGGGGTCACTACAATTGCTGGAGGAAAATGGAGCCGGGGAGGGGGGCATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTGGGAAGTAGTTGTTCACTACTGGTCATAGACAGAGGAAACAGAGCCATCAGGGAGATCCAACTTCACTTTGATGATTGCGCCTATCAATATGGAAGTGGATTCCCACTTGGGATTGCAATGCTTGTTGGGGCTGGCTTCTTTGGTTACATGTTGGCATTACTGCAGAGAAGGCTTGGTACAATTGTAGCATCCCAGGAAGCTCAGGTTCCAGTAATGGTAACATCTTCGGTTCCTCGAAGTTCATATCAAAAGCCCTTGAAATCTGTCAGGCCTCCTTTAATTCCATCAGAATATGAACCTGACAAGCTGGAAGAAGGCTTCTTTGGATCCCTCGGGAAGCTTCTTGCAAATGCTGGCTCGTCAATGGTGGAGATAATGGGAGGATTATTTCCTTCTTTCAAAAGAAAATCGCTAATTCACCAATTTCAAAGACAACCACTTCTCCAGCAACCTCAGAAGCAAGCAAATGCTTGGCCTGTGCAGGAAAGTTTCGTGATCCCTGATGAAGATGAACCTCCTTCGATTGACACAAGAGCCCCAACCCCTCGAAAAACCTATCCTTTCATGTCTAAGGATGCAGAGAAAATGCAACAACTGCTGCAAAGTCGTGCATTCTATAGTGGATGGGATGGAGATTTACATCAGCAGCAACAACAGCAGCCACAGCAACAGAAACACCATCATCGCCATCAGTACCAATCGGCAACCCCTCACACTTACTACGAGCAGAGCCATGAGACAACCAATGAGATAGTGTTTGGGGCAGTGCAGGAACAGGATAGGAAGCAGGAGTCTGTGGTTATCAAGCCTGTGAATTATGGGGAGTCACTGTATGAGCCTCACCATGTTAGGTCCAGAATGAGTTTCATGGGTTATGGGCACAGGTATTGA 1524 0.4692 MGKYLLLLTLTLLNLVLLATLQVSAAPSTTSPAKIVSGLLSNAMPAFTKWVWSLKATTKTAVSSRSMMKFEGGFSVETVFDGSKLGIEPYAVEVLPNGELLILDSANSNIYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVASQEAQVPVMVTSSVPRSSYQKPLKSVRPPLIPSEYEPDKLEEGFFGSLGKLLANAGSSMVEIMGGLFPSFKRKSLIHQFQRQPLLQQPQKQANAWPVQESFVIPDEDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLLQSRAFYSGWDGDLHQQQQQQPQQQKHHHRHQYQSATPHTYYEQSHETTNEIVFGAVQEQDRKQESVVIKPVNYGESLYEPHHVRSRMSFMGYGHRY 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02535 507 PANTHER - 33 507 - -
Spst3g02535 507 MobiDBLite consensus disorder prediction 423 455 - -
Spst3g02535 507 MobiDBLite consensus disorder prediction 375 397 - -
Spst3g02535 507 Pfam NHL repeat 147 172 IPR001258 GO:0005515
Spst3g02535 507 Gene3D - 40 231 IPR011042 -
Spst3g02535 507 SUPERFAMILY NHL repeat 76 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02535 Spst-Chr3 73388795 73392001 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02535 - - gmx:100781836 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02535 3 73388795 73392001 Spst3g02535 3 73388795 73392001 ECH
Spst3g02535 3 73388795 73392001 Spst3g02534 3 73387317 73387637 PCT