Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02496 ATGGCTCTGTCGCGAGTTTCTTCGTCATCGCCATCGATTCTGTTGAAACCCCTATCCTCCTACTTGTCGCTACGACGACGTTCGGTGTCCTCCTCCTCCACTGACCCTCTCACTGTGGAGACTTCTCTTCCCTTCACCGCCCATCGCTGCGATGAGCCCTCACGCGCCGTCGAGACCTCCGCGGCGGAGCTCCTCTCGTTCTTCCGCGACATGGCGCTGATGCGGCGGATGGAGATCGCGGCGGACTCCCTCTACAAGGCCAAGCTGATCCGCGGCTTCTGCCACCTCTACGACGGTCAGGAGGCCGTCGCGGTGGGGATGGAGGCTGCGATCACACGCAAAGACTGCATCATCACCGCCTACCGCGACCACTGCACCTTCCTGAGCCGCGGCGGAACCTTGCTCGAGGTGTTCGCTGAGCTCATGGGCCGCCGCGACGGCTGCTCCAAGGGGAAAGGTGGTTCCATGCACTTTTACAGGAAAGAGGGTGGCTTCTACGGTGGGCATGGAATTGTTGGGGCTCAGGTTCCGCTTGGTTGTGGCTTGGCTTTTGCTCAGAAGTATTGTAAGGATGAAAATGTGACGTTTTCGTTGTACGGTGATGGTGCAGCCAATCAGGGACAGTTGTTCGAGGCGCTTAACATTTCTGCGCTTTGGGATCTCCCTTCCATTTTGGTCTGCGAGAATAATCATTATGGAATGGGGACTGCTGAGTGGAGAGCGGCTAAGAGTCCTGCTTATTACAAGCGTGGAGATTATGTTCCTGGATTGAAGGTAGATGGCATGGATGCTCTTGCTGTGAAACAAGCTTGTAAATTTGCAAAGGAGTTTGCTTTGAAGAATGGTCCCATTATTCTTGAAATGGACACATACAGATATCATGGCCACTCCATGTCTGATCCTGGCAGCACATACCGCACACGTGATGAAATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGCTATTGTCTCATGAGATTTCTACTGAAAAGGAGCTAAAGGACACTGAAAAGGAAGTAAGAAAGGAAGTTGATGAAGCCATTGCCAAAGCAAAGGAAAGTCAAATGCCAGATCCATCTGATTTATTTAAGAACGTATATGTTAAAGGTTTAGGTGTCGAGGCTCGGGGCGCTGATAGGAAAGAAGTTATAGCTACTTTGCCCTGA 1185 0.5181 MALSRVSSSSPSILLKPLSSYLSLRRRSVSSSSTDPLTVETSLPFTAHRCDEPSRAVETSAAELLSFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRKDCIITAYRDHCTFLSRGGTLLEVFAELMGRRDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYCKDENVTFSLYGDGAANQGQLFEALNISALWDLPSILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDALAVKQACKFAKEFALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHEISTEKELKDTEKEVRKEVDEAIAKAKESQMPDPSDLFKNVYVKGLGVEARGADRKEVIATLP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02496 394 MobiDBLite consensus disorder prediction 297 316 - -
Spst3g02496 394 Gene3D - 19 392 - -
Spst3g02496 394 Coils Coil 336 356 - -
Spst3g02496 394 Pfam Dehydrogenase E1 component 70 365 IPR001017 GO:0016624
Spst3g02496 394 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 30 376 - -
Spst3g02496 394 CDD TPP_E1_PDC_ADC_BCADC 67 357 - -
Spst3g02496 394 FunFam Pyruvate dehydrogenase E1 component subunit alpha 27 387 - -
Spst3g02496 394 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 63 374 IPR017597 GO:0004739|GO:0006086|GO:0043231
Spst3g02496 394 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 54 375 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02496 Spst-Chr3 72769460 72781750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02496 1 394 Acyl Lipid Metabolism Gene Families AT1G24180 78.934 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02496 K00161 - gmx:100813933 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02496 3 72769460 72781750 Spst3g02496 3 72769460 72781750 ECH
Spst3g02496 3 72769460 72781750 Spst3g02496 3 72769460 72781750 PCT