Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02488 ATGGACTCATCACCAGAACAAGAACAGCCACGCAAGGGGAAACACAGGTTGCCGCCAAAATCAGTTTTCCTCTACTTCTCCTTCTTTCTCTTCATTTTCTTCTTCTGCTCCTCAAACCACTCTTTTTACTCTCACCCCTCCCTCCCTTCCTCTACTTTCGCCACCCCTTTTCCTCTCACCCTCCCAATACCCCTCCACGTGCACCACCGTATTATCTTTCCCGATCACCTTCTTCTCACACTCTCTCACCCCGAAATTCTCCCTTCTCACCAGCTCCACTGCGTCTACTACACCCTCCTCAACGCTTCAACCAATCCGCTTCTCCTCCCGCTTCTCTCCACCGACCGCTACGATGAATTCCGCTCCATAGCGCGCTGTCCGCTTCCAGGTACAAATTTCTCCGCCGTCGATTTGAGCTGGCGGGGCGAGAATGATCACCGAGACTTCCAAGTCCCGATGAAAGCAACGCCTCACAACTGGGAAAACTTGACGTACGAGGCCTTTCTAGACAACGACACCGTGGTGGTGTTCGTTAAAGGACTGAACCTCCGACCGCACAGGGTTTCCGACGCGAGCTTATTCCGGTGTCACTTCGGGGTACGAAACGAGGCATTTTGGTTAACCTCGAAAGCGGTCTCGGCGGCTCAGGAAGTCGTGCGGTGCGCGTTGCCGCAGAGTATTCGGAACAGCCCCGACAAGGCTCGCGGACTAAGCATCAGCGTGAGTCACGTGCGGCGGCGCGAGGTTGCCATCCCCTCCGTGGCGAGAATTGGCGGAGGTGAAAAAACAAGCACGGGGAAGGAGAAAAGGTTTGAACTGTGCGCGTGCACGATGGTGTGGAACCAGGCAGGTTCGATGCGGGAGTGGGTTATGTACCACGCATGGCTGGGCGTGGAGCGGTGGTTTATTTACGATAACAACAGCGACGATGGGATTGATGAGGTGGTAAGAGAGCTTGAGGATAAAGGGTACAACATTAGCAGAGTTACATGGCCTTGGGTTAAAAGCCAAGAAGCAGGGTTTTCGCATTGTGTGCTGAGAGCGAAAGAGGAGTGCAAGTGGGTGGGGTTCTTTGACGTGGACGAGTTTTTCTACTTCTACAAGATGCAACGGAATGTTCTGAGATCAATGGTGGCGAATTTCTCGTCGTCGAACTCAGTTGCAGAGATAAGGACAGGGTGTCATAATTTCGGTCCTTCCGGACTAACGACCCACCCTAAACAGGGAGTGGCCGTAGGGTACACCTGCCGGCTTAGGACTCCCGAAAGACACAAGTCAATTGTACGGCCTGATTTGGTTGACGTTAGTCTTTTGAACGTGGTGCATCATTTTGAAGTGAGGAAAGGGTTTGGATCCCGTAACGTGCCTCTTTCTGTTGCGGTTATAAATCACTATAAGTACCAAGTGTGGGACACGTTTAAGGCAAAGTTCTTGAGAAGGGTTGCTACCTATGTTGTGGATTGGAAAGAGGATGTGAACATTGGATCCAGGGACAGAGCGCCTGGACTGGGAACACAAGCAATTGAACCACGGGATTGGAGATTGAGATTTTGTGAGGTGTGGGACACTCGTCTCAAGGACTTTCTTCTTTCTAAGTTTTGTGACCCCCTAACGGGGTTGTTACCCTGGGAAAGCTCTTCGGAATAG 1647 0.5185 MDSSPEQEQPRKGKHRLPPKSVFLYFSFFLFIFFFCSSNHSFYSHPSLPSSTFATPFPLTLPIPLHVHHRIIFPDHLLLTLSHPEILPSHQLHCVYYTLLNASTNPLLLPLLSTDRYDEFRSIARCPLPGTNFSAVDLSWRGENDHRDFQVPMKATPHNWENLTYEAFLDNDTVVVFVKGLNLRPHRVSDASLFRCHFGVRNEAFWLTSKAVSAAQEVVRCALPQSIRNSPDKARGLSISVSHVRRREVAIPSVARIGGGEKTSTGKEKRFELCACTMVWNQAGSMREWVMYHAWLGVERWFIYDNNSDDGIDEVVRELEDKGYNISRVTWPWVKSQEAGFSHCVLRAKEECKWVGFFDVDEFFYFYKMQRNVLRSMVANFSSSNSVAEIRTGCHNFGPSGLTTHPKQGVAVGYTCRLRTPERHKSIVRPDLVDVSLLNVVHHFEVRKGFGSRNVPLSVAVINHYKYQVWDTFKAKFLRRVATYVVDWKEDVNIGSRDRAPGLGTQAIEPRDWRLRFCEVWDTRLKDFLLSKFCDPLTGLLPWESSSE 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02488 548 Pfam Glycosyltransferase family 92 269 485 IPR008166 -
Spst3g02488 548 PANTHER UNCHARACTERIZED 26 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02488 Spst-Chr3 72629496 72631142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02488 - - gmx:100778641 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02488 3 72629496 72631142 Spst3g02488 3 72629496 72631142 ECH
Spst3g02488 3 72629496 72631142 Spst2g01502 2 13781139 13782935 PCT