Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02416 ATGGGTGCTTCTGACAACAATCACCACTTTCTCCAAGTTGTCTTCAACAACTTCGACGTTCTTGCTCTACCCTTGGTTACGCTTGCTTATCCTTTATATGCTTCAATTAAGGCCATCGAGACCAAGTCTACTGCTGATGATCAACAATGGCTCACGTATTGGATTCTGTATTCCATTCTCACACTATTTGAGCTCACATTTGCCAAAGTTCTTGAACTGCTTCCCATTTGGCCTTTTGCCAAGTTGATATTCAGTTGTTGGTTGGTTCTGCCTCACTTCAATGGGGCTGCAGTTGTGTATAGGAATTACATCAGACCATTCTATATGAACCCACAAATCCCAATTCCACAAGGCTCTCAAATCTGGTATTTTCCCCAAAAGAAGTCCTTATTTAGAGAGCCAGATGATGTTTTGAGTGCTGCTGAGAGATACATGGAAGAGCATGGCACAGAAGCTTTTGAAAGACTTATAAGCAAGAATGACAGACAAGCTAGGGCAAGGAGGAATGGAAATTACATGATATTTGATGATGACTATAGATATTGA 546 0.4103 MGASDNNHHFLQVVFNNFDVLALPLVTLAYPLYASIKAIETKSTADDQQWLTYWILYSILTLFELTFAKVLELLPIWPFAKLIFSCWLVLPHFNGAAVVYRNYIRPFYMNPQIPIPQGSQIWYFPQKKSLFREPDDVLSAAERYMEEHGTEAFERLISKNDRQARARRNGNYMIFDDDYRY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02416 181 PANTHER HVA22-LIKE PROTEINS 24 147 IPR004345 -
Spst3g02416 181 Pfam TB2/DP1, HVA22 family 31 107 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02416 Spst-Chr3 68657213 68659284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02416 K17279 - gmx:100499934 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02416 3 68657213 68659284 Spst3g02416 3 68657213 68659284 ECH