Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02392 ATGCCACCTCCAAAGAATCATACTCCAAAAAATCCCATCAAACTTTCTCGGCTTTTTTCTTCTAAAATAGAGGCAAAAATGGGGTCGAAAGGGTCCGTCTCAATGAAGCTTTTGCTGCTTCTGCATTTGACTGTTCTCTGTGTTTCACAGGATTTTGATTTCTTCTACTTTGTTCAGCAGTGGCCAGGATCTTACTGTGACACGCAGAATAGTTGTTGCTACCCAACAACTGGGAAACCCGCTGCAGATTTTGGCATTCATGGCCTCTGGCCTAATTACAAGGATGGCTCTTACCCATCTAACTGTGATTCAAACAATCCTTTCCAGCAGTCTCAGATATCGGATTTGAGAAGCAGTTTGCAGAGAAATTGGCCCACTCTAGCATGCCCAAGTGGTAACGGGGTCCAATTCTGGACCCACGAATGGGAGAAACATGGCACTTGCTCGGAGTCACTCCTGAAGCAACATGACTATTTTGAAGCAGCTCTCGATCTCAAGCAGAGAGCCAACCTCCTCCGAGCTCTTACAAATGCTGGGATACAACCAGATGGAGAGTTATACAGTCTCAGCAGCATCAAGGGGGCTATAAAAGATGCAATTGGGTATACTCCATACATCGAATGCAATGTGGACGCATCACGTAACAGCCAGCTTTACCAAGTTTATTTGTGTGTGGACACTTCAGGGTCTGGCTTCATTGAATGCCCTGTGTTCCCTAAAGGCAAATGTGGGTCCCAAGTTGAGTTCCCAACTTTCTAG 759 0.4572 MPPPKNHTPKNPIKLSRLFSSKIEAKMGSKGSVSMKLLLLLHLTVLCVSQDFDFFYFVQQWPGSYCDTQNSCCYPTTGKPAADFGIHGLWPNYKDGSYPSNCDSNNPFQQSQISDLRSSLQRNWPTLACPSGNGVQFWTHEWEKHGTCSESLLKQHDYFEAALDLKQRANLLRALTNAGIQPDGELYSLSSIKGAIKDAIGYTPYIECNVDASRNSQLYQVYLCVDTSGSGFIECPVFPKGKCGSQVEFPTF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02392 252 ProSitePatterns Ribonuclease T2 family histidine active site 2. 137 148 IPR033130 -
Spst3g02392 252 Gene3D - 46 252 IPR036430 GO:0003723|GO:0033897
Spst3g02392 252 CDD RNase_T2_euk 52 249 IPR033697 -
Spst3g02392 252 ProSitePatterns Ribonuclease T2 family histidine active site 1. 84 91 IPR018188 GO:0003723|GO:0033897
Spst3g02392 252 PANTHER RIBONUCLEASE T2 49 245 IPR001568 GO:0003723|GO:0033897
Spst3g02392 252 Pfam Ribonuclease T2 family 52 235 IPR001568 GO:0003723|GO:0033897
Spst3g02392 252 SUPERFAMILY Ribonuclease Rh-like 46 251 IPR036430 GO:0003723|GO:0033897
Spst3g02392 252 FunFam Ribonuclease 3 46 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02392 Spst-Chr3 67972054 67973570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02392 K01166 - gmx:100305644 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02392 3 67972054 67973570 Spst3g02392 3 67972054 67973570 ECH