Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02377 ATGAAGTTTGGAAAAGAATACACGGCACAAATGGTGCCGGAGTGGCAAGAGGCATACATGGATTACAATTTTCTGAAATCCCAGCTGAAAGAAATCCAGCGTTTCAGACAGAGAACGAAGGCTCCTGCAGCCACACCAAGAGGACTGAGGCGAAAGATGACACTGTACAGAGCCTTCAGCGGGCTGACACAGAGACGGTACAAGCCTCTGAGTCCCTCCGGCGACATCGAGAGCCAGAACCAGAGCGAGCCCATCATGGTGCAGGCGGTGAAGCGAGGTGGGTCGGAGAGATACGAAACGACGTTTCTGATGAGCTCAGACGAAGGGGGGGAGTACGAGTTGGTGTACTTCAAGAGAGTGGACGATGAGTTGAACAAGGTGGAGAGGTTTTACAGGGGGAAAGTGGAGGAGGTGATGAAGGAAGCGGCAATGCTGAACAAGCAAATGGACGCTTTGATCGCTTTCAGGATCAAAGTTGAGAACCCCACCGCCTCCTTTGATCGCTCCGTCGAGATGACTCGCCTTGCCTCCGACGTTGCTTCTTCATCCGCCGTGCTCTCTGCTTCCACACCCCGAGGCGCCAAACTCAACAGAAAGGTTTCGATGATGATGGAAGTTATTGAAGAGGGTAGCACTCATCGTGAACAATCAGATGATTCTAATGATGATCAAGAACAAGAAAAAGCAACTGTTAAACCAAAAGTGGTGGAAAAGAAGCCAAAGGATATCAGGGGTATTAGACCAGCTCCTTTGGAAGTACTTGATCATGTGCAATTGAACCACACCTTTGAAACTCCACGTTCAACTATAAAAGGTGTTCTAAATTTCCCTGGCCACACAGAACTACATTTCAGCAGAAAAAATCTGAACAAAGTTGAGGAACTACTTCAACGCTCATTCATTGAATTCTACCGCAAGCTTCGCCTTCTAAAAAGCTACAGCTTTCTAAATACCTTGGCATTTTCAAAGATAATGAAGAAATATGATAAGATCACAACAAGAGATGCAGCTAAAGCTTATATGAAAATGGTAGACAATTCCCAACTTGGAAACTCTGACGAGGTCACAAAGCTCATGGATAGGGTTGAGAAAACGTTCACTAAGCACTTCTACAATTCAAATCGTAATAAAGCCATGAGTATCTTAAGGCCAACAGCAAAGAGGGAAAGACACAGAGTTACATTTTCCATGGGTTTTTTAGCAGGATGCACAGCAGCTCTGGTGTTAGCCCTTATTCTAATCGTTCGTACGCGAAAAATATTGGACCACTCAGGGAGTACTAAGTACATGGAAACCTTGTTCCCACTGCATAGTCTGTATGGATACGTAGTTCTACACTTGCTGATGTATGCTGCCGATATATACTTCTGGAGGCGGTACAGAGTGAACCACTCATTCATATTTGGTTTTAAGCAAGGCACTGACTTAGGCTACAATCAAGTCCTTCTCCTCGGTTTTGGTCTAGCAGTGTTAGCACTGGGTGGTGTGCTCGCAAACCTAGACATGCAGATAGATCCACAGACAAAAGATTACCAAACATTGACTGAACTTATTCCACTCATCTTGCTCCTTGCTGCGATTGCTATTTTATTGTGCCCCATAAACATCTTTTATCGCTCAAGCAGGGTTTTCTTCCTCGTGTGCCTATTTCACTGTATATGTGCACCTCTTTACAAGGTCACACTACCGGACTTTTTCTTGGCAGATCAATTTACTAGCCAGGTGCAAGCCTTGAGAAGTTTTGAGTTCTACATTTGCTATTACGGCTGGGGTAATTTCAAACAGAGAGAAAACACTTGCAACTCTAGCAGCGTATTCATAACTTTCTCATTCATCGTTGCTGTTATTCCCTACTGGTCCCGTTTCCTCCAGTGTATTAGGCGGCTGTTCGAAGAGAAAGATCCAATGCAAGGATATAATGGATTGAAATACTTCCTTACAATTATTGCTGTTTGCCTAAGGACAGCGTATAGTCATAACAATTCAATGGTGTGGAAAGTGTTGGCTTGGGTTTTCTCAATATTTGCAGCAGTTGCTTCTACATATTGGGACCTTGTAATAGACTGGGGCCTTTTGCAGAGGCGTTCCAAGAATCGCTGGTTGAGAGACAAACTCGCTGTCCCTCAAAAAAGTGTATATTTTATAGCCATGGTCCTTAATGTCTTGTTGAGATTTGCCTGGTTGCAGACAGTCTTGAGATTCAACTTTAGCTTCTTGCATAAACATGCCATGACTACCATTGTTGCATGTCTAGAGATCATTCGTCGTGGCATATGGAACTTCTTTAGATTGGAGAATGAGCACTTGAACAATGTTGGCAAGTACCGTGCATTTAAGTCTGTGCCTCTACCCTTCAATTACGACGAAGATGAAGATAAAGATGAGTGA 2388 0.441 MKFGKEYTAQMVPEWQEAYMDYNFLKSQLKEIQRFRQRTKAPAATPRGLRRKMTLYRAFSGLTQRRYKPLSPSGDIESQNQSEPIMVQAVKRGGSERYETTFLMSSDEGGEYELVYFKRVDDELNKVERFYRGKVEEVMKEAAMLNKQMDALIAFRIKVENPTASFDRSVEMTRLASDVASSSAVLSASTPRGAKLNRKVSMMMEVIEEGSTHREQSDDSNDDQEQEKATVKPKVVEKKPKDIRGIRPAPLEVLDHVQLNHTFETPRSTIKGVLNFPGHTELHFSRKNLNKVEELLQRSFIEFYRKLRLLKSYSFLNTLAFSKIMKKYDKITTRDAAKAYMKMVDNSQLGNSDEVTKLMDRVEKTFTKHFYNSNRNKAMSILRPTAKRERHRVTFSMGFLAGCTAALVLALILIVRTRKILDHSGSTKYMETLFPLHSLYGYVVLHLLMYAADIYFWRRYRVNHSFIFGFKQGTDLGYNQVLLLGFGLAVLALGGVLANLDMQIDPQTKDYQTLTELIPLILLLAAIAILLCPINIFYRSSRVFFLVCLFHCICAPLYKVTLPDFFLADQFTSQVQALRSFEFYICYYGWGNFKQRENTCNSSSVFITFSFIVAVIPYWSRFLQCIRRLFEEKDPMQGYNGLKYFLTIIAVCLRTAYSHNNSMVWKVLAWVFSIFAAVASTYWDLVIDWGLLQRRSKNRWLRDKLAVPQKSVYFIAMVLNVLLRFAWLQTVLRFNFSFLHKHAMTTIVACLEIIRRGIWNFFRLENEHLNNVGKYRAFKSVPLPFNYDEDEDKDE 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02377 795 CDD SPX_PHO1_like 2 338 IPR034092 -
Spst3g02377 795 ProSiteProfiles EXS domain profile. 601 795 IPR004342 GO:0016020
Spst3g02377 795 ProSiteProfiles SPX domain profile. 1 342 IPR004331 -
Spst3g02377 795 MobiDBLite consensus disorder prediction 209 237 - -
Spst3g02377 795 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 790 - -
Spst3g02377 795 Pfam SPX domain 1 344 IPR004331 -
Spst3g02377 795 Pfam EXS family 434 769 IPR004342 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02377 Spst-Chr3 67497247 67503179 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02377 - - gmx:100811310 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02377 3 67497247 67503179 Spst3g02377 3 67497247 67503179 ECH