Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02376 ATGAAGTTTGGCAAGGAAATTGCTGCACAAATGGTGCCAGAATGGCAGCTAGCATACATGGATTATGGCTACCTTAAATCCATCTTGAAAGACATCATACTTGACAAGCAAAGAAACAGGCCTCATTCCAGTGCCACCCCATCGGGTCTAAAACGAAAGTTATCACTCTACAGAACGTTCAGTGGCCTCACGCAGAGGCACTACCAGCCCTTGAGCCCTGAGCAGGACATTGAGAACCAACCCATTTTGGTGCACTCAGTGCTGCGAGATGGTCATGAAAAATATGAAACTACCTTTCTTATGGCCGCAGAAGAAGGTGGAGAGTACGAGTTGGTGTATTTTAGGAGGCTTGACGATGAGTTCAACAAAGTGGTGAAGTTCTATAGGTCCAAAGTGGAAGAAGTAATGAAGGAAGCTGCTGAGTTAAACAAGCAAATGGATGCTTTAGTAGCTTTCAGGGTAAAAGTTGAGAATCCAACTGAGTCCTTTGATTGCTCAGTTGAGATGACTCGTCTGGCTTCTGATGTGTCAGCTTCAACCACAGCATTGCATGCTAATACACCCAGGGGGGTCCAGCTGAACCGAAGGATTTCCACTGTAATTGAAGATATCAAAGAGGAAGGAAGTACCCATCATGGACATTTAGAGGAGTTTGGCAATGATGACAAAGGTAAAGAGATTGAAACTACCAACAAAAATATTGTACAGAAGAAGAATATCAGACCTATCAAACCCATCAAACCTGCTTCTGTGGAAATACTTAATCGAGTGCAGCTAAATAACACAAATGAGACTCCTCGTTCAACTATAAGAGGCTTCATCAACTATCCTGGCCAAGCAGAGTTAAATTTCACCAAGGAAAATTTGAGCAAAGTTGAAGAAACACTCAAAAAGGCTCTTGTTGATTTCTATCACAAGCTTCGCCTTCTGAAGAACTACACATTTCTAAATGTGCTGGCATTTTCAAAGATAATGAAGAAATATGATAAAATCACATCAAGAGGGGCAGCAAAAGCTTACATGAAAATGGTTGATAAGTCCTGCCTTGGGAGCTCTGATGAGGTCACCAGGCTTATGGAGAGGGTGGAAAATGTATTCATTAAGCACTTTTCCAACTCAAATCGAAATAAAGGAATGAGCATCCTGCGACCTAAACCAAAGAGAGAAAGACATAGGATTACATTTTTCATGGGTTTTTCTGCCGGATGCACTGCTGCTCTAACAGTGGCTCTTATTCTAATTGTCCGTACCCGAAAAATCATGGACCATTCAGGAAGTAGTAAATACATGGAAATCATGTTTCCTCTTTACAGTTTATTTGGATTTGTAGTGTTACACATGCTGATGTATGCTGCTAATATATACTTCTGGAGGCGATACAGAGTGAACCACTCTTTCATATTTGGTTTTAAGCAAGGCACTGATCTAGGCTACCATCAAGTCCTTCTCCTTAGTTTTAGCCTGGCAGCATTGGCACTAACCAGCGTGCTTGCAAATCTAGACATGCAAATAGATCCTGAGACAAAAGATTACAAATCATTCACTGAACTTTTGCCCCTTATCTTGGTTCTAATTGTGATTGCCATTTTAATATGCCCATTTAACATCGTATATCGATCAAGCCGAGTGTTCTTCCTTACATGTCTGCTTCACTGCATCTGTGCTCCTCTATACAAGGTCACACTGCCAGATTTCTTCATGGCCGATCAGTTTACAAGCCAGGTTCAAGCCTTGAGAAGTTTTGAGTTCTACATATGCTACTATGGTTGGGGTGACTTTACACACAGAGAAACAACTTGCAAATCATCCAATGTATTCATAGTTTTCTCATTCATTGTCGCTGTGATTCCCTACTGGTCTCGCTTTCTTCAGTGCCTGAGGCGCCTGTACGAGGAGAAAGATATGATGCAAGGATATAACGGGTTGAAGTGTTTCCTCACTATTGCAGCTGTTTGCCTAAGGACAGCTTGTACTCTTGATGATGGAATGGGATTGAAAGTAATGGCCTGGATATTCTCAATATCTACAGCCATTTTCTCCACATATTGGGACCTTGTCAAAGATTGGGGCCTCCTCCAAAGACATTCCAAGAACCGATGGCTCAGAGACAAACTCCTACTCCCTCAGAAAAGTGTATATTACGCAGCTATGGTGCTGAATGTGTTGTTAAGGTTTGCATGGTTACAGACAATATTGAATTTCAATTTCTCCTTCTTGCATAGACAAGCCATGATCAGCATTGTTGCCAGCTTAGAGATCATTCGTCGTGGCATATGGAACTTCTTTAGGGTGGAGAATGAGCATTTGAACAATGTTGGCAAGTACCGTGCATTCAAGTCTGTGCCTCTGCCCTTCAACTACGAGGATGATGATGAAGATAAGAATGAGTGA 2391 0.4182 MKFGKEIAAQMVPEWQLAYMDYGYLKSILKDIILDKQRNRPHSSATPSGLKRKLSLYRTFSGLTQRHYQPLSPEQDIENQPILVHSVLRDGHEKYETTFLMAAEEGGEYELVYFRRLDDEFNKVVKFYRSKVEEVMKEAAELNKQMDALVAFRVKVENPTESFDCSVEMTRLASDVSASTTALHANTPRGVQLNRRISTVIEDIKEEGSTHHGHLEEFGNDDKGKEIETTNKNIVQKKNIRPIKPIKPASVEILNRVQLNNTNETPRSTIRGFINYPGQAELNFTKENLSKVEETLKKALVDFYHKLRLLKNYTFLNVLAFSKIMKKYDKITSRGAAKAYMKMVDKSCLGSSDEVTRLMERVENVFIKHFSNSNRNKGMSILRPKPKRERHRITFFMGFSAGCTAALTVALILIVRTRKIMDHSGSSKYMEIMFPLYSLFGFVVLHMLMYAANIYFWRRYRVNHSFIFGFKQGTDLGYHQVLLLSFSLAALALTSVLANLDMQIDPETKDYKSFTELLPLILVLIVIAILICPFNIVYRSSRVFFLTCLLHCICAPLYKVTLPDFFMADQFTSQVQALRSFEFYICYYGWGDFTHRETTCKSSNVFIVFSFIVAVIPYWSRFLQCLRRLYEEKDMMQGYNGLKCFLTIAAVCLRTACTLDDGMGLKVMAWIFSISTAIFSTYWDLVKDWGLLQRHSKNRWLRDKLLLPQKSVYYAAMVLNVLLRFAWLQTILNFNFSFLHRQAMISIVASLEIIRRGIWNFFRVENEHLNNVGKYRAFKSVPLPFNYEDDDEDKNE 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02376 796 Coils Coil 282 302 - -
Spst3g02376 796 CDD SPX_PHO1_like 2 338 IPR034092 -
Spst3g02376 796 Pfam EXS family 433 769 IPR004342 GO:0016020
Spst3g02376 796 Coils Coil 125 145 - -
Spst3g02376 796 Pfam SPX domain 1 344 IPR004331 -
Spst3g02376 796 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 790 - -
Spst3g02376 796 ProSiteProfiles SPX domain profile. 1 342 IPR004331 -
Spst3g02376 796 ProSiteProfiles EXS domain profile. 601 795 IPR004342 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02376 Spst-Chr3 67489532 67494249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02376 - - vun:114176505 1389.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02376 3 67489532 67494249 Spst3g02376 3 67489532 67494249 ECH