Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02342 ATGAGAAGCTCTTGGATGAAGAAACAGTCCTTCATAACTGGCCCTAAGCCGACACTGAACTGGTTAATCCTGTGCCTGATAAGTCTCCTCGCTCTGATTGCAGTGTTGAGTTCTTCCTCTTCTTCTTCAAACACCGATGGTTCAGGACCTCGTTCTGCGGAATCGCTAATCTACTCAAACTACAGAAGGATAAAGGAGCAGGCGGCGGTGGATTACTTGGAGTTGAGGATTGTGTCGAGTGGTGGCGCGAGGCAGAAGGAGGTGGGACTTTGCGGCAAAGAAAGGGAGAATTTCGTGCCGTGTCATAATGTGTCTGCGAATCTGGTTTCGGGGTTTAAAGAGGGTGAAGAGTTTGATCGGCATTGCGAGGTCTATAAGGTAACGGAGAGGTGTTTGGTTCGGCCTCCCAAGGAATACAAGACTCCGTTACGGTGGCCAAATGGGAGGGATGTCATATGGAGCGCAAATGTGAGGATCACCAAAGATCAGTTTCTTTCATCTGGAAGTATGACCAAAAGGTTGATGCTACTAGAAGAGAATCAAATCGCCTTTCACTCGGAGGATGGGTTTATCTTCAACAGTGTGAAAGATTATGTTCGCCAACTTGCAGAGATGATAGGGTTAGGAAGTGACATTGAGCTTCCTCAAGCTGGTATTCGAAATATACTAGATATTGATTGTGGATTTGGTAGCTTTGGAGCTCATTTGTTGTCGCTGAAAATAATGGCGGTTTGTATCGCGGCGTATGAAGCTTCTGGCAGCCAAGTTCAATTGTCTCTTGAGAGAGGTCTTCCAGCTTTGATTGGCAACTTTATCTCCCGACAGCTTCCGTATCCATCATTATCATATGACATGGTTCACTGTGCTCAGTGCGGCATTATATGGGATGAAAAAGATGGATTGTTTCTTATAGAAGTTGATCGTGTTCTTAAACCTGGAGGATATTTTGTTTTAACCTCACCTACAAGCAGACCACAGAGTTCATCACGAGAGAAAAAGAGAATAATGTCAAACCCAATAGAAGGGCTGACCCAACAACTCTGCTGGACTCTTTTAGCTCAGCAAGATGAAACTTTTGTCTGGCAGAAGACTACTGATGTTGATTGTTATGCATCTCGTAAGGAGTATACTATACAGCTATGTGAAGGAGAGGATACTCAGTCATATTATAGGCCTCTTGTGCCATGTATAAGTGGGATGTCTAGCATGCGCTGGATTGCAATACAAAACAGATCTTCTGAATTGAGCTCGTCTGAACTTAAAATTCATGGAAAGTATTGTTTCTTAACAGCTTTCTTCTGCATATGTTTCTCCTTGTTTCTACCCCTCCAAATTTTGTTTCCTTTTTGTAATGATTTGCCTTTTCATGAATTTTTCTTTATTATTGCAGGAGTTCAACCTGAAGAATTTTATGAAGATTTACAACATTGGAGATCAGCTGTTAACAATTATTGGTCGTTACTTACGCCACTAATTTTCTCTGACCATCCAAAGAGACTTGGAGATGAAGATCCATTCCCTCCATATAACATGGTCCGGAATGTTATGGATATGAGTGCTAATTATGGGGGGTTGAATGCTGCCCTTCTGGAGGAGAAAAAGTCAGTGTGGGTCATGAATGTGGTTCCTTCCAGAGCTTCTAATTCACTTCCTCTTATACTAGATAGAGGTTTTGCTGGTGTCATGCATGATTGGTGTGAACCTTTCCCCACCTACCCCCGGACATATGATTTGCTTCATGCAGATGGACTTCTTTCTCATCTCTCCTCAGAGAGGTGCAGCATGATAGACTTGTTCTTAGAGATGGATAGAATATTGCGTCCAGAGGGATGGGTCATTCTTTCTGATACTATGGGAGCTATTGAGATGGCTCGCATGCTGGCAACACAAGTACGTTGGGAAGCAAGGATAATTGATCTTCAAAATGGCAGTGACCAGCGGCTACTTGTTTGCCAGAAACCTTTTGTGAAAAAATAA 1977 0.4299 MRSSWMKKQSFITGPKPTLNWLILCLISLLALIAVLSSSSSSSNTDGSGPRSAESLIYSNYRRIKEQAAVDYLELRIVSSGGARQKEVGLCGKERENFVPCHNVSANLVSGFKEGEEFDRHCEVYKVTERCLVRPPKEYKTPLRWPNGRDVIWSANVRITKDQFLSSGSMTKRLMLLEENQIAFHSEDGFIFNSVKDYVRQLAEMIGLGSDIELPQAGIRNILDIDCGFGSFGAHLLSLKIMAVCIAAYEASGSQVQLSLERGLPALIGNFISRQLPYPSLSYDMVHCAQCGIIWDEKDGLFLIEVDRVLKPGGYFVLTSPTSRPQSSSREKKRIMSNPIEGLTQQLCWTLLAQQDETFVWQKTTDVDCYASRKEYTIQLCEGEDTQSYYRPLVPCISGMSSMRWIAIQNRSSELSSSELKIHGKYCFLTAFFCICFSLFLPLQILFPFCNDLPFHEFFFIIAGVQPEEFYEDLQHWRSAVNNYWSLLTPLIFSDHPKRLGDEDPFPPYNMVRNVMDMSANYGGLNAALLEEKKSVWVMNVVPSRASNSLPLILDRGFAGVMHDWCEPFPTYPRTYDLLHADGLLSHLSSERCSMIDLFLEMDRILRPEGWVILSDTMGAIEMARMLATQVRWEARIIDLQNGSDQRLLVCQKPFVKK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02342 658 Gene3D Vaccinia Virus protein VP39 163 370 IPR029063 -
Spst3g02342 658 CDD AdoMet_MTases 221 319 - -
Spst3g02342 658 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 473 639 IPR029063 -
Spst3g02342 658 FunFam probable pectin methyltransferase QUA2 180 364 - -
Spst3g02342 658 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 30 402 IPR004159 GO:0008168
Spst3g02342 658 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 462 653 IPR004159 GO:0008168
Spst3g02342 658 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 97 403 IPR004159 GO:0008168
Spst3g02342 658 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 326 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02342 Spst-Chr3 67100805 67105503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02342 K23870 - gmx:100812239 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02342 3 67100805 67105503 Spst3g02342 3 67100805 67105503 ECH
Spst3g02342 3 67100805 67105503 Spst2g01674 2 15702660 15707271 PCT