Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02311 ATGGCTACAACTCAACCATCTTTGCGTCACTTCCTTCTGTTTCTCTTAGCATGCAACCTTTTCCGGCACCTTTACGCTTCATACACCACCAAAATCGGGGTCAACTATGGCACAGTGGCAGACAACCTCCCGCCGCCGTCCACGGTGGCCACCTTCCTCAAATCACAAACCGCCATCGACCGCGTCAAACTCTTCGACGCCAACCCCGACATGCTCCGCGCCTTCGCCGGCACCGGCATCTCCATAACTGTCACGTTGACGAACGCCGCCATCCCTTCCCTCTCGACGCTCCCCGCCGCGCAAGCGTGGCTGTCCGCCAACATCCTCCCCTTTCTCCCTGAAACTGCCGTGACACGTATCGCCGTCGGGAACGAGGTCCTCGCCACCTCCGACAAAACCCTAATCGCGCACATGCTCCCAACTATGAAATCCCTCCACGACGCCCTCTCCCTCGCCAACCTCACCACCGTCCAAGTCTCCACCCCTCACTCGCTCGGGATCCTGGCCTCGTCGGAGCCTCCCAGCGCCGCCGCGTTCCGCCGCGGATACGACAAAACCATCTTCGCGCCGATTCTAGACTTCCACCGGCGAACCAAGTCCCCATTCATGGTCAACCCGTACCCATTCTTCGGGTTCTCTCCCACCCGACCGGAGAGTCTGGACTACGCTCTATTTAGACCAAACATCGGCGTTTGGGATGCGGGGACGGGGGTGAACTACACGAACATGTTCGACGCGCAAATGGACGCGGTTTTCTCGGCGATGAAGAAACTCGGGTATGATGACGTGGAAGTGGTGGTGGCCGAAACGGGTTGGCCCTCTGTTGGTGACCCAAACGAAGCAGGTGTTAGTTTTGACAATGCGGCGTCGTATAACGGGAATCTTATTAAGCACGTTAACTCTGGAAAAGGGACCCCTCTTATGCCTAATAGGACTTTCGAGACTTTTATCTTCTCTTTGTTCAATGAGAATCTGAAGCCCACAGTTTCCGAACGTAACTATGGCTTGTTTAATCCCAATCTTACCCCTGTTTACGACGTCGGCGTTTTCATTGCCAAACAGGCAGCGGGTCCCACGGCATTAACACCCTCTGAGTCACCTTCTTCGTCATCGTCTTCGTCTTCAACGAAGAAATGGTGCGTGCCGAAGAGGGATGCCAGTGATGCAGCGTTGCAGGTCAACATTGACTTTGTTTGTAGCAGAAGTGGAATAGAGTGTGGGCCCATAAATGATGGTGGGCCATGCTTCAAGCCCAACACAGTTAAGTCCCATGCGGCGTATGCCATGAACGCATATTATCAAGCATCTGGTGGTCACGATTTCGACTGCGATTTCGGCCACACCGGACTCATCACTTACACCGACCCAAGTTACGACGCGTGTAGGTATCCTAATTCTTCTACTGGGCCTGGGCCTGAGTCTGGGCTGAATGTCAGAAAGCCTGATACAGCTGCATCACTCGGACGTGCCTTTCACAGCACTCTCTTATTTGTTACTATTCAAATTCTAATTTGTTCCACTTTTATCTAA 1530 0.5379 MATTQPSLRHFLLFLLACNLFRHLYASYTTKIGVNYGTVADNLPPPSTVATFLKSQTAIDRVKLFDANPDMLRAFAGTGISITVTLTNAAIPSLSTLPAAQAWLSANILPFLPETAVTRIAVGNEVLATSDKTLIAHMLPTMKSLHDALSLANLTTVQVSTPHSLGILASSEPPSAAAFRRGYDKTIFAPILDFHRRTKSPFMVNPYPFFGFSPTRPESLDYALFRPNIGVWDAGTGVNYTNMFDAQMDAVFSAMKKLGYDDVEVVVAETGWPSVGDPNEAGVSFDNAASYNGNLIKHVNSGKGTPLMPNRTFETFIFSLFNENLKPTVSERNYGLFNPNLTPVYDVGVFIAKQAAGPTALTPSESPSSSSSSSSTKKWCVPKRDASDAALQVNIDFVCSRSGIECGPINDGGPCFKPNTVKSHAAYAMNAYYQASGGHDFDCDFGHTGLITYTDPSYDACRYPNSSTGPGPESGLNVRKPDTAASLGRAFHSTLLFVTIQILICSTFI 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02311 509 Pfam Glycosyl hydrolases family 17 32 347 IPR000490 GO:0004553|GO:0005975
Spst3g02311 509 MobiDBLite consensus disorder prediction 359 379 - -
Spst3g02311 509 SMART X8_cls 378 463 IPR012946 -
Spst3g02311 509 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Spst3g02311 509 Gene3D - 372 467 - -
Spst3g02311 509 Pfam X8 domain 378 449 IPR012946 -
Spst3g02311 509 Gene3D Glycosidases 30 355 - -
Spst3g02311 509 FunFam glucan endo-1,3-beta-glucosidase 7 374 464 - -
Spst3g02311 509 SUPERFAMILY (Trans)glycosidases 32 348 IPR017853 -
Spst3g02311 509 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 448 IPR044965 GO:0004553|GO:0005975
Spst3g02311 509 FunFam Glucan endo-1,3-beta-glucosidase 3 31 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02311 Spst-Chr3 66534279 66536215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02311 13 349 Miscellaneous Gene Families AT3G46570 64.118 2.65e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02311 - - vra:106766036 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02311 3 66534279 66536215 Spst3g02311 3 66534279 66536215 ECH