Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02216 ATGAGTTCGATTCATTTGATAAACACCCTTGCTGCTCCATTTCGTTCTTTTTCTCCTCCGTCCCATTTTCCGCAATGCCATTCACCTCTCCGTTCCTCTGCTGTACCGAAACGAACTCGTTTCTCTTACTCGTCTGGGTTCCGCCTTGCCTCAGGTCCAACTCTGAATTCGGTTCCGCGTGGGAATGGAACTTATTCAGTTGCTGATTTCATGACAAAGAAGCAAGATTTGCATGTTGTGAAAATCTACACCACCGTTGATGAAGCTCTGGAGGCTCTTGTAAACAACAGAATCAGTGGTCTTCCGGTAATAGATGATAACTGGAATTTGGTTGGAGTTGTTTCCGATTATGATTTATTAGCTATTGACTCGATATCAGGAGGCCCTCAGAGTGATGCAAACTTGTTCCCGAACGTGGATAGCACTTGGAAAACATTCAATGAGCTACAAAAGTTGCTTAGTAAGACCAATGGGCAAGTTGTTGGTGATTTGATGACTCCAACTCCACTTGCTGTTCATAAATCGACTAGTCTTGAGGAAGCGGCTAGGCTGTTGCTTGAAACAAAATATCGTCGACTACCTGTGGTAGATGATGATGGAAAGCTAGTTGGACTTATTACAAGGGGAAATATTGTTAAGGCAGCTCTGCTATCAAAACGCGCGGGAGAGTGGTGA 675 0.4415 MSSIHLINTLAAPFRSFSPPSHFPQCHSPLRSSAVPKRTRFSYSSGFRLASGPTLNSVPRGNGTYSVADFMTKKQDLHVVKIYTTVDEALEALVNNRISGLPVIDDNWNLVGVVSDYDLLAIDSISGGPQSDANLFPNVDSTWKTFNELQKLLSKTNGQVVGDLMTPTPLAVHKSTSLEEAARLLLETKYRRLPVVDDDGKLVGLITRGNIVKAALLSKRAGEW 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02216 224 CDD CBS_pair_plant_CBSX 73 214 - -
Spst3g02216 224 Gene3D - 62 221 IPR046342 -
Spst3g02216 224 SMART cbs_1 76 124 IPR000644 -
Spst3g02216 224 SMART cbs_1 168 216 IPR000644 -
Spst3g02216 224 ProSiteProfiles CBS domain profile. 165 222 IPR000644 -
Spst3g02216 224 SUPERFAMILY CBS-domain pair 62 214 IPR046342 -
Spst3g02216 224 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 45 218 - -
Spst3g02216 224 ProSiteProfiles CBS domain profile. 71 130 IPR000644 -
Spst3g02216 224 Pfam CBS domain 161 214 IPR000644 -
Spst3g02216 224 Pfam CBS domain 67 121 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02216 Spst-Chr3 62038218 62041905 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02216 - - gmx:100814621 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02216 3 62038218 62041905 Spst3g02216 3 62038218 62041905 ECH