Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02210 ATGAACCACAAGCCATGGCATTGGAGGAAAAAATCTATGGAGAAAACAATCTTTGCAGTGGACAAAGGTGTCACTCCCTCTAGACCCACTGAAGAAGAGATACACAAACTTCCAACAACTAAAGAATCTGGATTGGAAAGATCATCACAAAATCTAAATAAGAAGTTGGCAACAGTCCTCCTTGATTCTCATTCTGGAGATGACCCTTTATCAAAACATGACCAAAAGTCCCAAACGGAAACTAAAGGCAAGGACAAGACAAAACAGGAAGTAGAATCTGTTGAAGACTTAGATGAAAAGGCGTCTTCTGTAAGTGTTACTCCTGAAGATGCAACGTTGGAGGAACCTTTGCATCCACCAAGCTGTGTTCAAGAAGAACAAGAGAAGAAGTTTAGTGGTGCCATTTCAAAGATATCTATAGAGCATGAGAAGATTCAGAAAGAATTGGAAGAGAAGTTGAGGGAAACAAGTAAAAGGATAGATGACCTAACTGCCGAGAATACTCATCTTGGTAATGCCTTGCTAACCAAGGAGAACTATATTGGGGACCTGCTAAAATGTAAACAAGAAACAGATGCTGAGTTTAGTACATTGATGGCTAGGTTAGACTCCACAGAAAAGGAAAATTCTTTCCTAAGATATGAGTTTCACGTGCTGGAGAAGGAACTAGAGGTCCGGAAGGAGGAGACAGACTATTGCCGTCAGTATGCAGATGCCTCTCGTAAACAGTACCTAGAGTATTCTCAGAAAGTGTCAAATTTAGAAGCTGAGTGTCAAAAACTCCGTCTTATGCTACAAAAAAAATCACCTGGTTCTGCTGGTATGGTGAATATGAAGAATGAAGTTGGAATGATGCGAAGAAGAAAGTCAAATTCTAGCAGGGAATTGATCTACAAAAGCAATCATATTGGAAACTCTACTGATGTGTCAGAGAAAAGTTTTGGCTTAATGATCAGACGATTGCAAGATCTGGATGAGGAGAACAAGGCTTTCAAAAGAATTTTGACCAAGAAAAACTCTGAACTAGAATCTTCAAGACTTATGTATGCCGAAACAGCTTCCAGATTATCACAGGCTGAGATTCTGCTTAGAAAGGTTTCTGAAAATCAGAAGTGTATGGAGCTAGCTAGGTGTTATCCCACATCAAATGAACTTCCTTTGATGTCAAATTGTGACATTTATAGTGATGATGAGGCTATCTCTTCTGGATCCTGGGCGACTGCTCTTATTTCAGAACTTGAACATTTAAGAACAGGGGCTAAAGTTCATAAAAGTAGTAAAGCCACTGAAGTTTCGGACATGAGTTTCATGGATGATTTTGTTGAGATGGAAAAACGAGCTATAGTTTCTATTGATAAACCTAAAAGAGAATGCTTCTCTGATATAAGTGGTAAGGAGTTAGTGCCAGTTGAACAAGATCATCTTGGCTTCAGTGAGAGGAAAAAGGAGATCCAATTAACTGAAAAATCGTTTGACTGGCTTCAGATTGTTTTGAATGCAATCTTAGAGGAGAAAATCATATCAAAACGAAGTCTTTATGAACTGTTTGATGACATAAAAATTGCTTTGGATTGCATGAATCATCCAACTGCTTCTAAACCTGATACAGAAGCAGAAAGAGAGCAACGCTTCAATTCTAATTCGAGAAAGTCAATATACAGGATTATCAACCTCATTGAAGGTATTGCTCCCAAGTCATTTATGTGCAACAATTGTCCAGATTGCTTGGAGGAGAATAAGCATTCAGACATATCACAGTCATCAACAACCAAAGACTATTTTGTTCACGTTTTCCAATGGAAGGTATCACACTTAAATCCTCTCCTGCACCAACTTATTCACACCTGCAAAGATTTGTTAACAGGGAGAGCTGATTTTGAAAATTTTATTGAGGAAGTAGCATTTGCTTTGGACTGGAGCATTAATAACTGTGCCACCTCCACAAATGCTGCAATTGCAAGGGATAAGATCAAGAAGCATTTTAGCAGTCTTTTATCACAAAATGAAAATAAAATAGATGACGAAGATAAACAGTCTTCTCGCTCAGCCTCGTTTGCATATCCAGAAGATCAGTGTGAGCTCTTCAACACAAAGAACAGTCAGTGTGATCTCCTTGAAGATATTAGAAAGTTAAAAGATGATTTAAGGAATGCAAAAACTGCGAAGAAATACTTGGAAGAAAAGCTGATGTCAGCAACTGATGAGAGACAGAACTTGACACAACAATGTCAAGAAGCACAGAACAACATCAGAGGTTTAGAATCAGAGATTGAGACACTGAAAGATCAGATTGAGAAACAAAAGATCATAAATGAAGATCTTGACACACAGCTTACAATGGCCCAGGCCAAGTTAAATGACATTTTTCAAAAGTTTTCGTCCTTAGAAGTTGAATTAGAGGATAAAAATAATTCCTGTGAGGAATTAGAAGCAACATGTCTGGAGCTTCAACTCCAATTGGAGAGCATTGCAAAGAAGGAATCTCCAACGTATGGCAGATACGAAGTAGAAAAGATATACCAAACTGGCTGGGAGATCACAACAGCTTCAACAAAGTTGGCAGACTGTCAAGAAACCATCCTAAACCTCGGGAAACAACTCAAGGCACTTGCTTCATCTAGTGAAGTTGCACTTTTTGACAAGGTTGCCACCACAACTAGTACCGTGGCCAATCCAACCCAGAAGAAGAACTTGATCAAACGATCCTCTCTACGAAATCAAATGCAAGCTGAGGATGAAGCTAAAGGAGTGATCCATACGTCTGTCCCAACTGAAGAAACTAAAAGAGAAAAAGATACTCAGATTCCATTCCTTCTTCAACCTGACACCGAAAAATCTCTGCAAAGTCCTAATAACTTGATTAATTCTCAAGAAACAAGTCTCACTTCAGAGAAAAATGATAGAAACAAAGCCACAGGATCAATGGCAATTGTTCCTGGTAAAAAACGAGTAGGCTTTGGTTTTCTTAAAAAACTGCTTTCAAGACGAAAGAAAGGGAGGGGTAAGGGAAGCAAGGTATTAGCCAAAGCATGA 3033 0.3874 MNHKPWHWRKKSMEKTIFAVDKGVTPSRPTEEEIHKLPTTKESGLERSSQNLNKKLATVLLDSHSGDDPLSKHDQKSQTETKGKDKTKQEVESVEDLDEKASSVSVTPEDATLEEPLHPPSCVQEEQEKKFSGAISKISIEHEKIQKELEEKLRETSKRIDDLTAENTHLGNALLTKENYIGDLLKCKQETDAEFSTLMARLDSTEKENSFLRYEFHVLEKELEVRKEETDYCRQYADASRKQYLEYSQKVSNLEAECQKLRLMLQKKSPGSAGMVNMKNEVGMMRRRKSNSSRELIYKSNHIGNSTDVSEKSFGLMIRRLQDLDEENKAFKRILTKKNSELESSRLMYAETASRLSQAEILLRKVSENQKCMELARCYPTSNELPLMSNCDIYSDDEAISSGSWATALISELEHLRTGAKVHKSSKATEVSDMSFMDDFVEMEKRAIVSIDKPKRECFSDISGKELVPVEQDHLGFSERKKEIQLTEKSFDWLQIVLNAILEEKIISKRSLYELFDDIKIALDCMNHPTASKPDTEAEREQRFNSNSRKSIYRIINLIEGIAPKSFMCNNCPDCLEENKHSDISQSSTTKDYFVHVFQWKVSHLNPLLHQLIHTCKDLLTGRADFENFIEEVAFALDWSINNCATSTNAAIARDKIKKHFSSLLSQNENKIDDEDKQSSRSASFAYPEDQCELFNTKNSQCDLLEDIRKLKDDLRNAKTAKKYLEEKLMSATDERQNLTQQCQEAQNNIRGLESEIETLKDQIEKQKIINEDLDTQLTMAQAKLNDIFQKFSSLEVELEDKNNSCEELEATCLELQLQLESIAKKESPTYGRYEVEKIYQTGWEITTASTKLADCQETILNLGKQLKALASSSEVALFDKVATTTSTVANPTQKKNLIKRSSLRNQMQAEDEAKGVIHTSVPTEETKREKDTQIPFLLQPDTEKSLQSPNNLINSQETSLTSEKNDRNKATGSMAIVPGKKRVGFGFLKKLLSRRKKGRGKGSKVLAKA 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02210 1010 MobiDBLite consensus disorder prediction 43 58 - -
Spst3g02210 1010 MobiDBLite consensus disorder prediction 17 117 - -
Spst3g02210 1010 Coils Coil 237 264 - -
Spst3g02210 1010 Coils Coil 135 166 - -
Spst3g02210 1010 MobiDBLite consensus disorder prediction 894 977 - -
Spst3g02210 1010 SUPERFAMILY Tropomyosin 655 824 - -
Spst3g02210 1010 Pfam Filament-like plant protein, long coiled-coil 88 875 IPR008587 -
Spst3g02210 1010 Coils Coil 792 826 - -
Spst3g02210 1010 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 996 - -
Spst3g02210 1010 MobiDBLite consensus disorder prediction 918 935 - -
Spst3g02210 1010 MobiDBLite consensus disorder prediction 26 42 - -
Spst3g02210 1010 Coils Coil 708 777 - -
Spst3g02210 1010 Coils Coil 188 208 - -
Spst3g02210 1010 MobiDBLite consensus disorder prediction 939 970 - -
Spst3g02210 1010 Coils Coil 321 341 - -
Spst3g02210 1010 MobiDBLite consensus disorder prediction 66 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02210 Spst-Chr3 61903919 61907680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02210 - - gmx:100810631 1585.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02210 3 61903919 61907680 Spst3g02210 3 61903919 61907680 ECH