Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02195 ATGTTTGGGTTGATCGGAAGAAAGGCCAATTTGTTGGGAGGATCCGGAAGAAGGTGGTTGAGCTTGGCGGCAACAGCAGCAGCAACAACCACTCCTGATGGTGGGGCCATGGAGCAGTTGCTTGCGCAGCTCCAATCTCATGTTCAGAAGGCTCTTGCTGGTGGAGGACCCGAGGCTGTGAAGAGGAACAGGAGCAGGAACAAATTTCTCCCCCGCGAAAGGATCGATCGCCTTCTTGATCCTGGCTCTTCCTTCCTCGAGCTTTCACAGCTTGCAGGACACGACTTGTATGAAGAGCCCTTGCCTTCTGGAGGGGTTGTTACTGGGATAGGTCCCGTGCATGGGCGACTGTGTATGTTTGTCGCCAATGACCCCACTGTTAAGGGAGGGACTTATTATCCTATTACTGTTAAGAAGCACCTCAGGGCACAGGAGATTGCTGCTCAGTGCAAACTGCCCTGTGTATATCTTGTTGACAGTGGAGGAGCTTTTCTTCCCAAGCAAGCTGAAGTGTTTCCAGACAGAGAAAACTTTGGTAGAATATTCTACAATCAGGCTGTAATGTCTGCTGAAGGAATTCCTCAAATTGCATTGGTGTTGGGTTCTTGCACTGCTGGTGGGGCTTATATACCTGCAATGGCGGATGAGAGTGTGATGGTCAAGGGTAATGGCACCATTTTTTTAGCAGGGCCACCTCTTGTTAAGGCTGCCACTGGAGAAGAAGTCTCAGCAGAAGATTTAGGAGGTGCTACTGTGCACTGCAAGACATCGGGTGTTTCTGATTATTTTGCTCAAGATGAACTCCATGCACTTTCGCTTGGGAGAAATATAATTAAGAATTTACATATGGCTGGGAAAGATGTCTTGGCAAATGGATTGCAAAATATAAACAATGAATATAAAGAGCCATTATATGACGTCAATGAACTTCGTTCTATTGCTCCCACTGATCTTAAAAAGCAGTTTGATATCCGATCAGTTATTGATCGCATTGTTGATGGAAGTGAATTTGATGAATTCAAGAAATTGTATGGCACTACACTTGTAACGGGATTTGGTAGAATTTTCGGACAGGCTGTTGGAATTATTGGAAACCATGGGATTTTATTCAATGAATCTGCACTGAAAGGGGCCCATTTCATTGAATTATGCACTCAACGTAACATTCCCTTGGTCTTCCTTCAGAACATCACCGGATTCATGGTTGGTTCGAGATCAGAGGCAAATGGCATAGCAAAGTCTGGTGCAAAAATGGTTATGGCTGTTTCTTGTGCAAAGGTACCTAAAGTCACTATAATGGTTGGAGGAAGCTTCGGTGCAGGAAATTATGCAATGTGTGGTCGTGCCTATAGTCCCAATTTCTTATTCCTTTGGCCTAATGCTAGAATTTCTGTGATGGGTGGTGCTCAGGCTGCTGGTGTGCTGACTCAAATAGAGAAAGGCAACAAGAAAAAGCAAGGAATACAGTGGAACAAAGAAGAAGAGGAAAAGTTCAAAACGAAAGTGGTAGAGGCTTATGACAGAGAAGCGAGTCCTTATTACTCAACAGCAAGGCTTTGGGATGATGGAATCATTGATCCAGCGGATACAAGAAAAGTCATTGGTCTATGCATCTCTGCCTCCTTGAATCGTGCCATTGAAAAAACAAAATATGGTGTGTTTAGAATGTAA 1671 0.4458 MFGLIGRKANLLGGSGRRWLSLAATAAATTTPDGGAMEQLLAQLQSHVQKALAGGGPEAVKRNRSRNKFLPRERIDRLLDPGSSFLELSQLAGHDLYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCVYLVDSGGAFLPKQAEVFPDRENFGRIFYNQAVMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDELHALSLGRNIIKNLHMAGKDVLANGLQNINNEYKEPLYDVNELRSIAPTDLKKQFDIRSVIDRIVDGSEFDEFKKLYGTTLVTGFGRIFGQAVGIIGNHGILFNESALKGAHFIELCTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKVTIMVGGSFGAGNYAMCGRAYSPNFLFLWPNARISVMGGAQAAGVLTQIEKGNKKKQGIQWNKEEEEKFKTKVVEAYDREASPYYSTARLWDDGIIDPADTRKVIGLCISASLNRAIEKTKYGVFRM 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02195 556 FunFam Methylcrotonoyl-CoA carboxylase beta chain 295 556 - -
Spst3g02195 556 Gene3D - 25 285 - -
Spst3g02195 556 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 302 548 IPR011763 GO:0016874
Spst3g02195 556 FunFam Methylcrotonoyl-CoA carboxylase subunit beta 21 287 - -
Spst3g02195 556 SUPERFAMILY ClpP/crotonase 297 556 IPR029045 -
Spst3g02195 556 Pfam Carboxyl transferase domain 63 547 IPR034733 -
Spst3g02195 556 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 37 293 IPR011762 -
Spst3g02195 556 SUPERFAMILY ClpP/crotonase 38 278 IPR029045 -
Spst3g02195 556 PANTHER ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED 33 556 IPR045190 -
Spst3g02195 556 Gene3D - 295 556 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02195 36 556 Acyl Lipid Metabolism Gene Families AT4G34030 81.766 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02195 K01969 - gmx:100791763 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02195 3 61512602 61517131 Spst3g02195 3 61512602 61517131 ECH