Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02194 ATGTCGTTGCTGTTACTGCCTCAACCTTCCGCTACCCTCTCTCCGGTCACCGCCTCCGCCGTCGCACGCAAACCTTTCGCCACTGTCACGCCTCCACGCCGGAGAACGCTCACTCCAAAAGCTGCAATTTCAATCTCTCCCCCAACAACATCACCCAATGCAATCCCTACGAAGAAGGTTCTGGTTCCCATTGGTTTTGGCACCGAAGAAATGGAGGCCGTTATCATGATTCACGTCCTGCGCCGCGCCGGGGCTGACGTCACCGTCGCCTCCGTGGAACCGCAGCTCCAAGTCCAGGCCGCCGGAGGCACCAAACTGGTCGCGGACACTGACATTTCCGCCTGTTCCGATGCAGTTTTTGACCTCGTTGCTTTACCCGGAGGAATGCCTGGCTCTGCAAGACTTCGGGATTGTAAAGTTCTGCAAAAAATTACGAGCAAACAAGCTGAGGAAAACAGGCTCTACGGTGCTATCTGTGCTGCTCCTGCTGTGACCCTATTGCCATGGGGCCTTTTGAAGAAAAAAAAGGTGCTTTGCTTAACTTGGATTTTAGTAGAATCAATATTTAGTGCGATGGCTCTAAGTTACTATGGCTCTAAGTTACTGTTGCCAAACTAA 618 0.5227 MSLLLLPQPSATLSPVTASAVARKPFATVTPPRRRTLTPKAAISISPPTTSPNAIPTKKVLVPIGFGTEEMEAVIMIHVLRRAGADVTVASVEPQLQVQAAGGTKLVADTDISACSDAVFDLVALPGGMPGSARLRDCKVLQKITSKQAEENRLYGAICAAPAVTLLPWGLLKKKKVLCLTWILVESIFSAMALSYYGSKLLLPN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02194 205 CDD GATase1_DJ-1 60 164 - -
Spst3g02194 205 Pfam DJ-1/PfpI family 58 179 IPR002818 -
Spst3g02194 205 NCBIfam DJ-1 family protein 59 179 IPR006287 -
Spst3g02194 205 Gene3D - 51 194 IPR029062 -
Spst3g02194 205 SUPERFAMILY Class I glutamine amidotransferase-like 58 181 IPR029062 -
Spst3g02194 205 FunFam Protein DJ-1 homolog C 53 194 - -
Spst3g02194 205 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 57 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02194 Spst-Chr3 61509479 61510188 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02194 - - gmx:100777134 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02194 3 61509479 61510188 Spst3g02194 3 61509479 61510188 ECH