Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02183 ATGGTCCACAGCCGCCAGCGAAGCCATCCTCCAAATCTGCTCTTGCAATCTGCCATGGATTTGCTCTGGACCGAGAATGTGGTGCCGCACGCCTCTCACTTCTCCGCCGCGATCTACTTCGCCTTCGCCAGTTTCGTGGCCAGGTTCTTCCTTGACAGATTCGTCTTTCGCAGGTTGTCCATTAGGATCTTGACAAAGGGTAGATCTCCTTCACATATTACTACTAAGGAAATGCAAGTAAAGATTGGGAAATGCTCAGAGTCAATGTGGAAGCTAACATATTATGCTACTGTTGAAGCATTCATTCTTAAAATTACCTACCAGGAACCCTGGTTCAGTAATACGAAATTATACTTCAATGACTGGCCAAATCATGAGTTAAAGAGTTCCCTAGTGTTGTACTACATGTGCCAGTGTGGGTTCTACATATACAGTATTGCTGCTATTCTCACATGGGAGACTAGAAGGAAGGATTTTGCGGTGATGTTTACCCACCATGTAATTACTGTTTTACTGATTGGGTGCTCATATATGACAAGTTTTTTTAGGATTGGTTCTATAATCCTCGCCCTTCATGATGCAAGTGATGTATTCATGGAAGCTGCCAAGGTTTTCAAGTATTCTGGAAGGGAGTTTGGTGCAAGTGTGTGTTTTGGATTTTTTGCAGTTTCGTGGCTCATATTGCGGCTAATTTTCTTTCCTTTTTGGGTTATTAAAGCAACAAGCATTGATCTTCAGCAGTGCCTAAACCTGTCAGAGGGTTATGACATGTTTCTTTACTACATTTTTAATACAATGCTCATAATGCTACTCATCTTTCATATATACTGGTGGAAGCTCATATGTGCAATGATCTATAGACAGCTGGAAAATAGGGGGAAAGTTGGCGAGGATATAAGATCTGGTAAGCATATTTCATCGGACAGATTGAGGATTCAGACGATGATTGAAATTGACTAG 960 0.4167 MVHSRQRSHPPNLLLQSAMDLLWTENVVPHASHFSAAIYFAFASFVARFFLDRFVFRRLSIRILTKGRSPSHITTKEMQVKIGKCSESMWKLTYYATVEAFILKITYQEPWFSNTKLYFNDWPNHELKSSLVLYYMCQCGFYIYSIAAILTWETRRKDFAVMFTHHVITVLLIGCSYMTSFFRIGSIILALHDASDVFMEAAKVFKYSGREFGASVCFGFFAVSWLILRLIFFPFWVIKATSIDLQQCLNLSEGYDMFLYYIFNTMLIMLLIFHIYWWKLICAMIYRQLENRGKVGEDIRSGKHISSDRLRIQTMIEID 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02183 319 ProSiteProfiles TLC domain profile. 83 290 IPR006634 GO:0016020
Spst3g02183 319 Pfam TLC domain 84 282 IPR006634 GO:0016020
Spst3g02183 319 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 75 305 IPR016439 GO:0046513|GO:0050291
Spst3g02183 319 SMART lag1_27 83 290 IPR006634 GO:0016020
Spst3g02183 319 PIRSF LAG1_LAC1 9 314 IPR016439 GO:0046513|GO:0050291
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02183 Spst-Chr3 60892656 60897838 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02183 - - ccaj:109801348 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02183 3 60892656 60897838 Spst3g02183 3 60892656 60897838 ECH