Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02178 ATGCGCTCAATTCTTCACGTGCTGTTAAGTTCAGGAATGGGACAAATTGGTGATCCTAAAAAGCTCATAGGTGGGGCCGTGGATTATGACAATATGAGCCCCTCCGTCTTCCTCCTATGGCTTGTCACAGTTCCTTTCCTAGCCTACTCTTCCCATGCTTCTGTCCCACTTCTAGGGTATTATATAGACTGTGGAGGTTCGAAGGAGGTAACGGTAGACAATCTGAAATACGTTCCTGATGGAAGTTACATCAAGGTGGGAAACATCACCCCGATCAACAAGCCAGGCTTGTTGCCTATACTGTCCACACTGCGTTACTTTCCCGACGCGTCGGCCAGAAAATATTGCTATTCGTTGCCGGTACTCAAGGGCAGCAAATACCTGGTGAAGACCGTGTACTACTACGGAGGTTTCGATGGAGGGAAGCAGCCTCCGGTGTTCGATCAAATCATTGAAGGGACAAGATGGAGCGTTGTGAACACCACGGAGGACTATGCCAAAGGCCTTAGCTCCTACTTTGACATCACGGTGGTGCCTTCGGGGAAGACCTTGAGCGTGTGCTTGGCCAGGAACGAACACACCGGTAACTCAAGCCCTTTCATTTCGGCCCTGGAGGTGAGGAACTTGGATGCTTCTTTGTATAATCCCACTGACTTCTCCAAGTACGCGCTTGTAACCGTCGCCAGAAGTGCCTTTGGAGCTGAAGATATCATTGGGTAA 720 0.4972 MRSILHVLLSSGMGQIGDPKKLIGGAVDYDNMSPSVFLLWLVTVPFLAYSSHASVPLLGYYIDCGGSKEVTVDNLKYVPDGSYIKVGNITPINKPGLLPILSTLRYFPDASARKYCYSLPVLKGSKYLVKTVYYYGGFDGGKQPPVFDQIIEGTRWSVVNTTEDYAKGLSSYFDITVVPSGKTLSVCLARNEHTGNSSPFISALEVRNLDASLYNPTDFSKYALVTVARSAFGAEDIIG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02178 239 Gene3D - 58 210 - -
Spst3g02178 239 PANTHER OS07G0107800 PROTEIN-RELATED 61 235 - -
Spst3g02178 239 Pfam Malectin-like domain 62 235 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02178 Spst-Chr3 60814526 60821550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02178 50 235 Receptor kinase-like Gene Family AT2G37050 36.458 1.56e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02178 - - gmx:100803695 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02178 3 60814526 60821550 Spst3g02178 3 60814526 60821550 ECH