Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01946 AAAGAAAATTGCATTTTTGCTCCCACAAGGACACCCCATTTATCCACTATGGATTACGAAAGGATCCAAAAGCCTCAGGGTGGTGGGGGATTTTCACCGGGAAAATTGAGGAGCATGCTACTGGGTGTGGAGAAGAAGAGGAAAGAAGAGGAAGAGCTTGATTCTACTTTCACCACGAGATCTCAAAATTCAGACATGGATGAAACTGGTGGAAGCGGTTCTGATCATTGTAAAGATGTAGATGTTGTGAGTGTTCTTCCTGAATATTCAACTTCTGCTATAGTTCGCACCAGTAGCATTGAGGCAGTTGTTGGTGATCGTTTTGTGAAGGCTAATACAGCAGTGACTTCAAGGAATAAAATCTTAGAAGATCCTTCTTTAGATTATGATAGTGGGAATGATAATATGAGCATGTCCTCATCAGTGTTTGAATTTCAAAAGGCCGAGCGGGCTCCACAGAGAGTTCCAGTGGGGCCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCCCAGAAGTGGATAGCAAGTCCAACATCAAACAGGCCAAAGACTGCACAGACCCAGGGGCAAGGTGGGCATGTAGGACTGCGTAAGGCTGGTAGTCTTGGTTATGGAAGCCGGCAATCTTCAATGAAGGTTGTTGTTGAAGTTCCAGATCAAAGAGAAATTGCTTTAGATGAACCAGATACTAAGCAAATTGATACAAATCAAACTAAGATGGAAAGTGGAGGACAGAAATTTGTGAGTTGGGAGGCTGATCCATATGCAATTGCAAGTTCTTGTGTTAGTCTTAGCCAGCACAATTCATCTCTTGCTGTCCAGAATGCAACAACATTTGTTCCTCCCCCTTCAACAGCTCGGTCTGTATCAATGAGAGATATGGGAACCGAAATGACCCCTATTGCTAGCCAGGAGCCTTCAAGAACAGGTACCCCTGTGAGGGCAACAACACCAATGCGCAGCCCTAATTCTTCCCGGCCTTCCACTCCCCCCAGATCCTCCCCTGCATCTACTTTAACTGATCTACATAGTGACAATATGAATCTCAACAAGAATGAATTGTCGGAAAAGGAGCTACAAATGAAAACCAGGCGAGAAATAATGGTCCTTGGGACACAACTAGGTAAAATGAATATTGCTGCCTGGGCTAGCAAAGAAGAGGAAGATAAGGATGCATCCACTTCCCTGAAAACAAAAGCAGAACCACCTAAGAGTGTTGTTGAAGCACGTGCAGCAGCATGGGAGGAAGCTGAGAAGGCCAAGTATATGGCCAGGTTTAGGCGTGAGGAGATGAAAATTCAAGCATGGGAAAATCATCAGAAAGCAAAAACAGAAGCCAAGATGAAAAAAATTGAGCTTCGAATCCTAATATGGAAGAATATGTTAGTCAGCCTAACAAAGGCAATATCTGTAAGTGGACAGTTTACTGAAGCATGTCAAACTGAGATGTTTCTTATGATATTGACTAGTGATAAGGAGTTTAGGGAATTTTGTGAAGTGTGGAAGTGGAAGAGGATCGACCTTCCAAGACGAATGCCTGGATTGAGTGATGTAGGGGAGGTACAGAAATGA 1575 0.4362 KENCIFAPTRTPHLSTMDYERIQKPQGGGGFSPGKLRSMLLGVEKKRKEEEELDSTFTTRSQNSDMDETGGSGSDHCKDVDVVSVLPEYSTSAIVRTSSIEAVVGDRFVKANTAVTSRNKILEDPSLDYDSGNDNMSMSSSVFEFQKAERAPQRVPVGPFSKPAPSKWDDAQKWIASPTSNRPKTAQTQGQGGHVGLRKAGSLGYGSRQSSMKVVVEVPDQREIALDEPDTKQIDTNQTKMESGGQKFVSWEADPYAIASSCVSLSQHNSSLAVQNATTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSRPSTPPRSSPASTLTDLHSDNMNLNKNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKAEPPKSVVEARAAAWEEAEKAKYMARFRREEMKIQAWENHQKAKTEAKMKKIELRILIWKNMLVSLTKAISVSGQFTEACQTEMFLMILTSDKEFREFCEVWKWKRIDLPRRMPGLSDVGEVQK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01946 524 MobiDBLite consensus disorder prediction 331 350 - -
Spst3g01946 524 MobiDBLite consensus disorder prediction 299 356 - -
Spst3g01946 524 MobiDBLite consensus disorder prediction 177 204 - -
Spst3g01946 524 MobiDBLite consensus disorder prediction 385 404 - -
Spst3g01946 524 PANTHER OS02G0116800 PROTEIN 117 453 - -
Spst3g01946 524 MobiDBLite consensus disorder prediction 15 78 - -
Spst3g01946 524 MobiDBLite consensus disorder prediction 149 168 - -
Spst3g01946 524 MobiDBLite consensus disorder prediction 40 56 - -
Spst3g01946 524 MobiDBLite consensus disorder prediction 301 324 - -
Spst3g01946 524 Pfam Remorin, C-terminal region 408 454 IPR005516 -
Spst3g01946 524 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01946 Spst-Chr3 46275856 46283387 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01946 - - gmx:100810593 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01946 3 46275856 46283387 Spst3g01946 3 46275856 46283387 ECH