Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01907 ATGAGGGTGTGGCAGAGAGCCACTGGAGCCATTAAAGACAAGAACAGCATATGGGTTGCAAAGTTCGGACGACGGAGTCCATTCCACAACCATGAGTTACAAGCTCTGGTAATCAAAGCCACGAGCCATGATGATAAATGCATAGATTATAAGAACGTGCAGAGAGTGTTCCAATGGCTCCGAACCTCACCCTTGTACCTGAAACCTGTTGTGTGGGCTCTCTCCATGCGCATGCAAAGGACTCGAAACTGGGTTGTGGCGCTGAAAGGCTTGATGCTCATCCACGGCGTTTTCTGCTGTGACATCCCTGTGGTGCAACGCATAGGGCGGTTACCCTTTGACCTCTCAAACTTTTCTGATGGCCATTTGAGCACGGCAAAGGCTTGGAGCTTCAACGTTTTCGTTCGTGGTTATTTTGCGTATTTGGATAAAAGAGCGTCGTTTGTGTCCTCCGAGTTTACAAAGATAAACAATAGCAAGGAGATGGAGGTGGAGGAGACGTTGATGGAAGAGCTCGAGTGTTTGCAAAAGTTGCAAGGCATGATTGATATGCTTCTTGAGCTCAGGCCTCGGAATGAGAACAAGAATGTTGGGTTGATTCTTGAAGCCATGGATTGTGTTATAGTTGAGGTTTTCAGTGTGTATAGTATGTTTTGCAGTAAAATTGCCAAGGTTTTGTTGAGGATATATGAAATGGGTGGGAGGATTGAAGCGAGTATTGGCCTCAAGGTTCTTCAGAAAGCATCGATTCAAAGGGGGGAATTATCTTCGTTCTTTGAGTTTTGCAAGGATATTGGGGTCCTCAACGCCTCTCAGTGCCCCAAGATTGATAGAATTTCTCCTGAAGATATTCAAGAACTTGAGATGATAATCAATGGTGCCTCTTCCAAGAAGGGTGGTGTTGTGGCAAATGATGAGGACAAGGCAATTGTGGTGAGAGATTGTTCTGCCATTGCACCTGTTTCACACCAGAGGGAGCCGGAGAATGGTTTGATGACCGTCATCACTCACCAATGGGAGCTTTTTGATGATGATGTGATGGATGATGCTACAGGAATGCATATTGTCTCTAATGGAGAGAAGGATAGTCGCATCACAACCAACCCTTTTGAGGAATCATACAGCATCGTACCTTATCTTCCTGTTCACAATCAACCTCTTCCGGATCTAATTAGTTTTTAG 1182 0.4526 MRVWQRATGAIKDKNSIWVAKFGRRSPFHNHELQALVIKATSHDDKCIDYKNVQRVFQWLRTSPLYLKPVVWALSMRMQRTRNWVVALKGLMLIHGVFCCDIPVVQRIGRLPFDLSNFSDGHLSTAKAWSFNVFVRGYFAYLDKRASFVSSEFTKINNSKEMEVEETLMEELECLQKLQGMIDMLLELRPRNENKNVGLILEAMDCVIVEVFSVYSMFCSKIAKVLLRIYEMGGRIEASIGLKVLQKASIQRGELSSFFEFCKDIGVLNASQCPKIDRISPEDIQELEMIINGASSKKGGVVANDEDKAIVVRDCSAIAPVSHQREPENGLMTVITHQWELFDDDVMDDATGMHIVSNGEKDSRITTNPFEESYSIVPYLPVHNQPLPDLISF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01907 393 FunFam Putative clathrin assembly protein 7 153 - -
Spst3g01907 393 CDD ANTH_N_AP180_plant 33 148 - -
Spst3g01907 393 Gene3D ANTH domain 154 307 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Spst3g01907 393 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 314 IPR045192 GO:0048268|GO:0072583
Spst3g01907 393 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Spst3g01907 393 Pfam ANTH domain 32 291 IPR011417 GO:0005543
Spst3g01907 393 SUPERFAMILY GAT-like domain 170 293 - -
Spst3g01907 393 Gene3D - 5 153 IPR008942 -
Spst3g01907 393 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01907 Spst-Chr3 43005248 43006429 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01907 - - gmx:100814886 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01907 3 43005248 43006429 Spst3g01907 3 43005248 43006429 ECH