Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01857 ATGGCAGCAGATTGGGGTCCTGTGGTGATATCAGTGGTGCTGTTTGTGCTGTTAAGTCCAGGGCTTCTGTTTCAGCTTCCTGCCAAGGGCAAAGTGGTGGCCTTTGGGAGCATGCAAACTAGTGGCCTATCTATCTTAGTCCACACCATCATCTTCTTTGGACTCATCACCATCTTTCTACTTGCCATTGGTGTGCACATTTACTCTGGATAA 213 0.4789 MAADWGPVVISVVLFVLLSPGLLFQLPAKGKVVAFGSMQTSGLSILVHTIIFFGLITIFLLAIGVHIYSG 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01857 70 Pfam Protein of unknown function (DUF3339) 3 68 IPR021775 -
Spst3g01857 70 PANTHER OS05G0103400 PROTEIN 3 70 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01857 Spst-Chr3 33596640 33596852 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01857 - - gmx:100777861 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01870 1 26868549 26868758 Spst3g01857 3 33596640 33596852 PCT