Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01854 ATGGATCCAGACGCGTTGGCAAAGGCATTCGTAGAGCACTACTACTCCACCTTCGACACCAACCGAGGGGGCTTGGCCAATCTCTACCAGGAGGGTTCCATGCTCACCTTCGAAGGCCAGAAGATCCAGGGCGCTTCCAACATCGTCGCCAAGCTCACTTCCCTCCCTTTCCAGCAGTGCCACCACACCATCTCCACCGTCGACTGCCAACCTTCCGGTGTCAACGCCGGCATGCTCGTCTTCGTCAGCGGCAACCTCCAACTCGTCGGTGAACAACACACTCTCAAATTCAGCCAGATGTTCCATTTGATACCAACTCCCCAGGGAAGCTATTATGTGTTGAATGACATATTCCGTTTGAACTATGCATGA 372 0.5376 MDPDALAKAFVEHYYSTFDTNRGGLANLYQEGSMLTFEGQKIQGASNIVAKLTSLPFQQCHHTISTVDCQPSGVNAGMLVFVSGNLQLVGEQHTLKFSQMFHLIPTPQGSYYVLNDIFRLNYA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01854 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
Spst3g01854 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Spst3g01854 123 FunFam Nuclear transport factor 2 1 123 - -
Spst3g01854 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Spst3g01854 123 CDD NTF2 2 122 IPR018222 -
Spst3g01854 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 2 122 IPR045875 GO:0006913
Spst3g01854 123 Gene3D - 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01854 Spst-Chr3 33515789 33518170 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01854 - - gmx:100777334 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01854 3 33515789 33518170 Spst3g01854 3 33515789 33518170 ECH
Spst1g01877 1 26961453 26962729 Spst3g01854 3 33515789 33518170 PCT