Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01849 ATGACGACATCAAGGCGCTTTGCGGACAGGAAGGTGGAGAAGTTTGAGAAGAATATTACCAAAAGAGGATTTGTGCCAGACACAACCTCTAAAAAGGGAAAAGACTACCCTGTTGGCCCACTGCTGCTGGGTTTCTTCGTCTTTGTTGTCATTGGATCATCTCTCTTTCAGATTATCAGGACAGCAACAAGTGGAGGCATGGCTTAA 207 0.4541 MTTSRRFADRKVEKFEKNITKRGFVPDTTSKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATSGGMA 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01849 68 PANTHER STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 1 68 IPR010580 GO:0005783
Spst3g01849 68 Pfam Ribosome associated membrane protein RAMP4 5 61 IPR010580 GO:0005783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01849 Spst-Chr3 33397252 33398833 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01849 - - gmx:100776262 132.494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01849 3 33397252 33398833 Spst3g01849 3 33397252 33398833 ECH