Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01511 ATGGTGATATTGGACAACCACGTAACACAACCAGGGTGGTGTTGCAGTAACTCTGACGGTAATGGGTTCTTCGGTGACAAATTTTTTGACCCAAATCTGTGGATATTGGGTCTCACCAAGATGGCCACACTTTTCAATGGAGTCACTAATGTGGTGGGTATGAGCTTGAGGAATGAGCTCCGAGGACCCAAACAAAACGTGGACGATTGGTACAAGTACATGGTGAAAGGAGCAGAAACAATCCATGCAGCAAATCCTGATGTTCTTGTCATTCTATCCGGTCTAAATTTTGACAAGGACTTGTCATTCATTCAAAAACGACCAGTAAAGCTGACATTCAAGGGAAAATTAGTATTTGAGGCTCATTGGTATGCCTTTACTGATGGTGAAGCTTGGGTCAATGGAAACCCAAACCAAGTATGTGGGCAAGTGGTTGGAAATGTGATGAGAACCTCTGGGTTCTTGGTGAACCAAGGATGGCCTCTGTTTATTAGTGAGTTTGGTGTAGACTTGAGAGGCACCAACGTGAACGACAACCGCTACCTTAGCTGCTTCTTGACAGTGGCGGCTGAGCTTGACTTGGATTGGGCCTTGTGGACACTCGTTGGAAGCTACTACTTTAGACAAGGCGTTGTAGGAATGGAAGAGTTTTATGGGATTCTTAATTGGGATTGGAGCCAAGTTAGGAATGTCAGTTTCTTAGACAGAATCTCCTCCCTCCAACTTCCATTTCGAGGTCCAGGCATAACAATAGGCAATCCATACAAATTGATATTCCATCCTTTAACGGGTTTGTGTGTGATAAGAACGTCAGTACTAGACCCACTTACATTAGGTCCTTGTTCTTTATCTGATGCTTGGAGCTACACACCCCAAAAAATTCTATCAATAAAGGGTACTTACTTCTGCATTGAAGCAGAGAATGAAGGGATGCCTGCAAGCCTTGTGGGAATATGCTCAGATTCTAACACTAGATGGGAAATGATCTCAGATTCAAAGTTGCACCTTTCGTCCAAACTTAGTGATGGTTCTGATGTGTGCCTAGATGTTGATGACAACAACATTATTGTAACCAATGCTTGCAAATGCTTGAGCAGAGATCCTACATGCGACCCCAGTAGTCAATGGTTCAAACTCGTTGACAGCGGAAGGAAGTCAACCTTCACAACCTCCTCTTCGTCAATGCTAAATTCATCAGACCTTTTATGGAAATCATTAAGCTCAATATAA 1230 0.4317 MVILDNHVTQPGWCCSNSDGNGFFGDKFFDPNLWILGLTKMATLFNGVTNVVGMSLRNELRGPKQNVDDWYKYMVKGAETIHAANPDVLVILSGLNFDKDLSFIQKRPVKLTFKGKLVFEAHWYAFTDGEAWVNGNPNQVCGQVVGNVMRTSGFLVNQGWPLFISEFGVDLRGTNVNDNRYLSCFLTVAAELDLDWALWTLVGSYYFRQGVVGMEEFYGILNWDWSQVRNVSFLDRISSLQLPFRGPGITIGNPYKLIFHPLTGLCVIRTSVLDPLTLGPCSLSDAWSYTPQKILSIKGTYFCIEAENEGMPASLVGICSDSNTRWEMISDSKLHLSSKLSDGSDVCLDVDDNNIIVTNACKCLSRDPTCDPSSQWFKLVDSGRKSTFTTSSSSMLNSSDLLWKSLSSI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01511 409 Gene3D Glycosidases 1 238 - -
Spst3g01511 409 Pfam Cellulase (glycosyl hydrolase family 5) 2 201 IPR001547 GO:0004553|GO:0071704
Spst3g01511 409 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 1 383 - -
Spst3g01511 409 SUPERFAMILY Ricin B-like lectins 252 379 IPR035992 -
Spst3g01511 409 SUPERFAMILY (Trans)glycosidases 1 261 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01511 Spst-Chr3 18552414 18554180 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01511 1 396 Glycoside Hydrolase AT1G13130 58.209 3.37e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01511 - - vun:114177138 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01511 3 18552414 18554180 Spst3g01511 3 18552414 18554180 ECH