Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01507 ATGTCTCGTATAGAAACCAACCCTCATTTTTCTAGATCACGACCTGAGTACGTAGCAGATGATAATGAGCAACCACATATGCCATTTGGGCCACGCCAAAAACGTCGTGGCCAACCATCCACACAAGCAGCTACACCTATACCAGATGTATCGCGATTTGAGAATGAAGATCGTGTTCCATTACGAACACGACCTCAGCATGAAGACTTTCCATTAGAAGATCATCCACAACCACCTATTTTGCAAGAGCCACGCCATGGCAAATCAAAAAGAAGTCCTAGTAAGCAGCCAACAATTCAAGGTTTGCGACCAGTTAAGCCATCAAAAGTAAATTTTCAAGAGCCACCTCCCTCTGCTACTGTCCCCCCAACACTGCCGCCACCCGACCATCCTGCCGAGCGTCGGCAGCAGCCACGCCGTGAGCCCCTCCATGATCCCCGCCACAGTGGTATAAAGTTGCCTAAGGAGCAAAAGTCCCAACCCTTGACATGGTTAGGTGCTTGCTTGTGTGTAATATTTTGGCTTATCATAATTATAGGAGGGTTAATAGTCCTTATAGTGTACTTTGTTTTTCGCCCTCAAAGTCCTCATTTTGATGTGTCTAGTGTGACCTTAAACGCTGCATACCTTGATCTTGGATATCTGCTCAACGCTGATCTAACCATGTTGGCTAACTTTACAAATCCAAACAAGAAGGTACATGTGGATTTCAGCTCCGTGATCATTTATCTCTACTACGGAAGTACCCTCATTGCCACTCAATATGTTGAGCCTTTCTCAGCTGCAAGGCTTCAATCAAGGTTTGCAACTATCCATATGGTCTCTAGTCAAGTTCAACTGCCATTAAGAGAAAGCCAGCGTCTTGTGAAACAAATGGAAGGTAATGGGGTAATTCTTGAAGTTAAGGGAGTATTTCGTGCAAGATCCAAATTGGGAAGCATTTTAAGGTATTCATATAATCTTTACGGTCGTTGCAAAGTTATGCTAACACGTCCTCCTGATGGCATTTTGCTCAAAAAGAAATGCAGAACAAAGCGCTGA 1041 0.4428 MSRIETNPHFSRSRPEYVADDNEQPHMPFGPRQKRRGQPSTQAATPIPDVSRFENEDRVPLRTRPQHEDFPLEDHPQPPILQEPRHGKSKRSPSKQPTIQGLRPVKPSKVNFQEPPPSATVPPTLPPPDHPAERRQQPRREPLHDPRHSGIKLPKEQKSQPLTWLGACLCVIFWLIIIIGGLIVLIVYFVFRPQSPHFDVSSVTLNAAYLDLGYLLNADLTMLANFTNPNKKVHVDFSSVIIYLYYGSTLIATQYVEPFSAARLQSRFATIHMVSSQVQLPLRESQRLVKQMEGNGVILEVKGVFRARSKLGSILRYSYNLYGRCKVMLTRPPDGILLKKKCRTKR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01507 346 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 119 338 - -
Spst3g01507 346 MobiDBLite consensus disorder prediction 51 90 - -
Spst3g01507 346 MobiDBLite consensus disorder prediction 132 154 - -
Spst3g01507 346 MobiDBLite consensus disorder prediction 116 131 - -
Spst3g01507 346 MobiDBLite consensus disorder prediction 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01507 Spst-Chr3 18521785 18522825 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01507 - - gmx:100791466 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01507 3 18521785 18522825 Spst3g01507 3 18521785 18522825 ECH