Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01500 ATGCAATTTTTAACATGGCTTGTAATTTCAACAACACTAACGCAGAGTAATGTAACTGGTGGAAGCAGGCTAAGAGAATGCAATTTGAGAGCCATATTCAACTTCGGCGACTCCAATTCTGACACAGGCGGTCTCTCAGCGGCGTTCGGACAAGCTCCTCCTCCCAACGGAATCACGTTTTTCCACTATCCCAGCGGACGATTCTCCGATGGCCGCCTCATAATCGATTTTATAGCGAAGAGCTTGGGCTTTCCTTATCTAAGTGCTTACTTGGACTCGGTGGGGTCGAATTTCAGCCACGGAGCGAATTTCGCGACTGCGGGATCCACTGTTAGACCTCAGAACAGAACTAAGTCTCAGAGCGGATACAGTCCAATTTCCCTTGATGTGCAGTTCGTGCAGTTCTCTGATTTCAAAACCAGATCCAAATTCGTTCGCCAACAAGGAGGGGTGTTTAAGGAATTGTTGCCCAGAGAGGAGTATTTTTCTGAGGCTCTATATACCTTCGATATAGGCCAAAATGATCTCACAGCTGGCTACAAACTCAATTTGACCACAGAACAAGTCAAGGCCTATATTCCTGATGTATTGGGCCAGTTCTCCTCAGTCATAAAGGGTGTGTATGGGGAAGGTGGAAGGTGGTTTTGGATACACAACACAGGCCCATTGGGATGCTTGCCATACATGCTGGATCGCTATCCCATGAGCCCAGCCCAAATGGATGACTTTGGATGTGCTAAAGCATTCAATAGGGTGGCCCAATATTTTAATAAAAAATTAAAAGAAGCTGTTGAGAAACTGAGGGAAGAACTGCCAGAGGCTAAACTCACCTATGTTGATGTGTATAGGGTGAAGTACACCCTCATCAGCCATGCCCAAAAATATGGTTTTGACAAGGGGGTGATAGCATGCTGTGGACACGGTGGGAAATACAACTTCAATAATAGTGAGAGATGTGGAGCAAGCAAGAGAGTTAATGGGAGAGAGATTGTGATAGCCAAGTCCTGCAAAGATCCAACTGTGAGGATTATTTGGGATGGAATCCATTACACCGAAGCTGCTAATAATTGGATCTTCCAACAAATAGTCTATGGCTCATTTTCAGATCCACCTACCTCATCATTAGGAGATACAAATTCACGTTCTTGTAGTGAATTTTGA 1161 0.4479 MQFLTWLVISTTLTQSNVTGGSRLRECNLRAIFNFGDSNSDTGGLSAAFGQAPPPNGITFFHYPSGRFSDGRLIIDFIAKSLGFPYLSAYLDSVGSNFSHGANFATAGSTVRPQNRTKSQSGYSPISLDVQFVQFSDFKTRSKFVRQQGGVFKELLPREEYFSEALYTFDIGQNDLTAGYKLNLTTEQVKAYIPDVLGQFSSVIKGVYGEGGRWFWIHNTGPLGCLPYMLDRYPMSPAQMDDFGCAKAFNRVAQYFNKKLKEAVEKLREELPEAKLTYVDVYRVKYTLISHAQKYGFDKGVIACCGHGGKYNFNNSERCGASKRVNGREIVIAKSCKDPTVRIIWDGIHYTEAANNWIFQQIVYGSFSDPPTSSLGDTNSRSCSEF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01500 386 Coils Coil 257 277 - -
Spst3g01500 386 Gene3D SGNH hydrolase 23 364 IPR036514 -
Spst3g01500 386 CDD SGNH_plant_lipase_like 31 366 IPR035669 -
Spst3g01500 386 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 7 371 - -
Spst3g01500 386 Pfam GDSL-like Lipase/Acylhydrolase 32 362 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01500 Spst-Chr3 18451909 18454308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01500 31 369 Acyl Lipid Metabolism Gene Families AT4G10950 28.409 3.19e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01500 - - var:108335696 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01500 3 18451909 18454308 Spst3g01500 3 18451909 18454308 ECH