Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01393 ATGGCTGATATGGATTCAACTTTTGATCAACCCCACCAATCTACTGCTCCTACTGCCTCCACCACTCAACATCAACCCTCCATCCACCACTCCACTGCTGTCACCAACCGTCTTCAGACCACCCTGGAGAATCCAAGTATTAAAGGTGAGATAGTAAGCAATGGAAGCAGAGGAATAGTGAGAGAAGGAATTGAAGAAGGAGAAGCTTCATCTTCATCACTGAAAGGAACTAAGAGGAAGGCGAAGCAGCAGCAGCAGCAGCAAGAAGCCAAACAAGACGCACCGGAAGCAGACAAGACCAAGCCAAAACCTCGAGCTAAACGAGCCAAGACCTCTAAGCCTCAATCCGAACCTGAGTACTTCGAAGATAAGCGCAACTTGGAAGATTTGTGGAAGGAAACATTCCCCGTTGGAACTGAGTGGGACCAATTGGATTCCGTGTATCAATTCAAATGGGATTTTTCGAATCTAGAAAATGCGTTTGAAGAGGGTGGTTTGTTGTTTGACAAGAAAGTTTACCTCTTTGGTTGTACTGAGCCTCAACTGGTCATGTTTAAAGGGGAAAGCAAAGTTGTCTGCATACCTGTTGTAGTAGCTGTTGTATCACCTTTTCCACCATCTGATAAAATTGGGATAAACTCAGTTCAGAGGGAGGCTGAAGAGATAATTCCCATGAAGCAAATGAAAATGGACTGGGTTCCATATATTCCTTTGGAGGACCGAGATAGCCAAGTTGATAGACTAAAATCTCAAATATTTATCTTGAGCTGCAACCAAAGAAGGTCTGCTTTGAAACACCTGAAGTTGGATAGATTAAAGAAATATGAATACTGCTTGCCTTATTTCTATCAGCCATTTAAGGAAGATGAACTTGAACAGAGCACTGAAGTTCCAATAATATTTCCAGCTGAGCCAAAGCCGGTCTTCTGTGAATTTGATTGGGAGTTAGATGAACTTGAGGAGTTTACAGATAAACTCATAGAGGAGGAGGAGTTATCAGAAGATCAGAAGGATGCATTCAAGGAATTTGTCAAAGAAAAGGTTCGTGAAGCAAAGAAAGCTAATAGAGAGGCAAGGGAGGCTCGGAAAAAAGCCATTGAAGAAATGAGCGAGGAAACTAAATCTGCATTTGAGACTATGAGATTTTACAAGTTCTACCCTGTTCAATCTCCTGATGCACCAGATGTATCAAACGTTAAGTCGCCATTCATTAACAGGTATTATGGAAAGGCTCATGAGGAGGCAACCCCCGGTGCCCCATCAAAATTTCTTTGCCGGTGTAGTTTTCTAAAGCGACATACAATGTAA 1308 0.4251 MADMDSTFDQPHQSTAPTASTTQHQPSIHHSTAVTNRLQTTLENPSIKGEIVSNGSRGIVREGIEEGEASSSSLKGTKRKAKQQQQQQEAKQDAPEADKTKPKPRAKRAKTSKPQSEPEYFEDKRNLEDLWKETFPVGTEWDQLDSVYQFKWDFSNLENAFEEGGLLFDKKVYLFGCTEPQLVMFKGESKVVCIPVVVAVVSPFPPSDKIGINSVQREAEEIIPMKQMKMDWVPYIPLEDRDSQVDRLKSQIFILSCNQRRSALKHLKLDRLKKYEYCLPYFYQPFKEDELEQSTEVPIIFPAEPKPVFCEFDWELDELEEFTDKLIEEEELSEDQKDAFKEFVKEKVREAKKANREAREARKKAIEEMSEETKSAFETMRFYKFYPVQSPDAPDVSNVKSPFINRYYGKAHEEATPGAPSKFLCRCSFLKRHTM 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01393 435 Gene3D - 72 153 - -
Spst3g01393 435 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 107 413 IPR039313 GO:1900034
Spst3g01393 435 Coils Coil 74 94 - -
Spst3g01393 435 MobiDBLite consensus disorder prediction 82 103 - -
Spst3g01393 435 MobiDBLite consensus disorder prediction 65 121 - -
Spst3g01393 435 Coils Coil 319 339 - -
Spst3g01393 435 MobiDBLite consensus disorder prediction 1 30 - -
Spst3g01393 435 Coils Coil 341 375 - -
Spst3g01393 435 MobiDBLite consensus disorder prediction 7 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01393 Spst-Chr3 17449305 17459887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01393 - - gmx:100805080 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01393 3 17449305 17459887 Spst3g01393 3 17449305 17459887 ECH
Spst3g01393 3 17449305 17459887 Spst9g01656 9 16759106 16763911 PCT