Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01369 ATGAGGGAAGCTACAACGTTAACTGGTTTGCATTTTGCCACAACAACGTTGCTGACAATCTTTCTTAAGTGGTTGGGATATATCCAAACCTCTCATCTTCCTTTACCCGATCTTATCAAATTTGTCTTATTTGCAAATTTCTCAATAGTCGGAATGAATGTGAGTTTGATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCGGTATCTTGTTTCCTGGAAGTTATCTTGGACAACGTGAGATATTCAAGGGACACAAAGCTTAGCATTTCTCTAGTTCTCCTTGGTGTAGCTGTATGTACTGTCACTGATGTGAGCGTCAATGCTAAGGGTTTCATAGCTGCTGCAGTTGCAGTTTGGAGTACCGCACTACAGCAGTATTATGTGCATTTTCTTCAGAGGAAGTATTCTCTTGGATCCTTTAACTTGTTAGGTCACACTGCACCAGTACAGGCCGCAAGTTTACTGCTAGTAGGTCCCTTTGTGGACTATTGGTTGACAAACAAACGAGTTGATGCCTACAACTATGGTTTGACATCCACATTGTTGATCATTATCTCTTGCACCATCGCAGTAGGGACAAACCTGAGCCAGTTCATCTGCATTGGCAGGTTCACAGCCGTATCCTTCCAAGTGCTTGGCCACATGAAAACAATTCTGGTACTGGCACTAGGATTCGTTTTCTTTGGAAAAGAAGGTCTGAATTTGCAAGTGATTCTGGGCATGCTCATTGCAATAGTGGGAATGATATGGTATGGCAATGCATCTTCTAAACCAGAAGGGAAGGAACGTCACAGTTTACCCATTAATTCTACTCCTAAGACACAAGACTATAATGTACTACCAGTATCCTCTGAAACGAATCAGTAA 885 0.4192 MREATTLTGLHFATTTLLTIFLKWLGYIQTSHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVILDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTALQQYYVHFLQRKYSLGSFNLLGHTAPVQAASLLLVGPFVDYWLTNKRVDAYNYGLTSTLLIIISCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLALGFVFFGKEGLNLQVILGMLIAIVGMIWYGNASSKPEGKERHSLPINSTPKTQDYNVLPVSSETNQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01369 294 MobiDBLite consensus disorder prediction 273 294 - -
Spst3g01369 294 PANTHER SOLUTE CARRIER FAMILY 35 5 261 - -
Spst3g01369 294 MobiDBLite consensus disorder prediction 267 294 - -
Spst3g01369 294 Pfam Triose-phosphate Transporter family 5 257 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01369 Spst-Chr3 17116039 17118068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01369 53 282 Organic Solute Cotransporters AT1G53660 25.322 1.23e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01369 K26224 - gmx:100814890 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01369 3 17116039 17118068 Spst3g01369 3 17116039 17118068 ECH
Spst3g01369 3 17116039 17118068 Spst9g01678 9 17049745 17053949 ECH
Spst3g01369 3 17116039 17118068 Spst9g01639 9 16569718 16572835 PCT