Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01340 ATGGCTGCTTCTCATGGTAATGCACACTCTGATGCTGCAAAGATGGAACAGATAATCACTGAGTTCTTTGCGAAGAGCCTTCACATAATACTCGAATCAAGGGCACTCAATGTGTCCTCGCGCAATTTCTACGGTGATCAAGCTGTTTTATCTCCTTGTTCATCGTCTTCATCTTCGTCGAGCGTGCGGCCGAGGGATAAGTGGTTCAATTTGGCGCTCCGGGAGTGTCCGGCGGCGTTGGAGAACATTGACGTCTGGCGCCAGAACAATCTTGAGTGCATAGTGATTGATGTGATTTTGGTGCAGAGGCCTCTGGATTGGGACCCTGTGACTGTGAGTTTTTCTCCAAAAAGGGTTCTCCCGAGGAGTTCTTCGCTGAAAGAAAGATGCCCTTTTGGCTGTAACACTGATCAGGAAGAATTGGGGGTTGTGGGAAGGAATGAAAAGATTGTGGAGAGGTGGGTTGTGCAGTATGAGAGTGGGAAGACAAGGGATTTTAGTTCTGGCAGTAGGAGGTCAAGCAGTGTTTCTTTGCATAACTTGTATAAGAAATCAACTTTGCTTTTGAGGTCTTTGTATTCCACTCTTAGACTTTTACCTGCCTACAAAATTTTCAGAGAGCTTCTTTCTTCTGGAAAGATTAGGGATTTTACCCTTGCTCACCGTGTGTCTTCTTTTGTTGAGCCCTTCACCAGGAAAGAAGAGGCAGACATGATGAAATTCGGGTTCACCCCTGTTGATACTTCTTCTGGTAGGCTGTGTCTTAGTGTGATGTATTGCCCCTCAGTCTCAGGAGTGAGCTCAGAACCTTCGACTCCAATGTCCCCACGAGTTATAGCAGACTATGTTGGGAGTCCATTGCCTGATCCGTCCACGAGGTTTCCTTCTCTCCCCGTGGCAGGATTGCCATCTCATGGCTCTCCATTATCGTTGCCATCTTCAAGGCAGCGTAGTTTGAGTTTTGATCATTATAGAACCTCATCTCCGACTTATACACCTTCGCCTACTTATTCAGAATCACTCTCACCAGTGTATAATGCAAGTTTGCGACGTTTCCCCCCTGCAAGTTTGCCTCCTCATCCAACTGAGATGTCTTTGATTCAAAAGAAGAACACAAATTTTGATGATCACTATCCCTATCCATCATCTTCAACAGATTATTCAGGACCGTTACCATGTAAACCACTTTTACGATCTGAAAGTGCTCCTGTCAGCATACCTACTGAAGTTGCTAATTCCCCTGGATACTCCAATAGGCATAATGTGCCTCCGTCTCCTCCCCGAAGAGGTTCAAGGGGCACTGCTAAGATTGATAGAAGTACAAACGCTATGCATACCGGTACAAACGCTGAGAGGTTCTTTTCTCTTGGAAAAGATGAGTATCGAAAAAATTCTGGAGTCAAGATATCAGCTAACAGCTCACCACAGATTTCAATTTCCAGAAGCTCCAGTAGGTCTTACCAGGATTATCTTGACGATACTGATTTTACTTGTCCGTTTGATGTGGATGATGATGATATAACGGATCCAGGAAGCAGAGCTGAATCTCCATATCATGGTCTTTTGGCTGAGACTTATGAATCTGGAGGATTCTTTCCCATTAGAAAGTCTCATGATGCTGCGGTTGGTGCACTTGTACAAATGCTGAAGAAAGCGCCACCTCTCCGTCAAGATTTCTCCACTTCACAACACCTGTCAAAAGGAGGTACAAACGTAGAAACTGGGAACAATAACATTCAAGGGCCCAGTCATATCCTAGAATCATCAAGACCAGCGAGCATGATGTCTTCTGGGATCATAGCCACTAGAAAAACCACAGCTGATGCACTGGAAGAGTTCCACGGTTACAAAGAGATGAAAAACTTGTTGCTTATGCGAGGTAGTAAGCACCAGATATAG 1899 0.4502 MAASHGNAHSDAAKMEQIITEFFAKSLHIILESRALNVSSRNFYGDQAVLSPCSSSSSSSSVRPRDKWFNLALRECPAALENIDVWRQNNLECIVIDVILVQRPLDWDPVTVSFSPKRVLPRSSSLKERCPFGCNTDQEELGVVGRNEKIVERWVVQYESGKTRDFSSGSRRSSSVSLHNLYKKSTLLLRSLYSTLRLLPAYKIFRELLSSGKIRDFTLAHRVSSFVEPFTRKEEADMMKFGFTPVDTSSGRLCLSVMYCPSVSGVSSEPSTPMSPRVIADYVGSPLPDPSTRFPSLPVAGLPSHGSPLSLPSSRQRSLSFDHYRTSSPTYTPSPTYSESLSPVYNASLRRFPPASLPPHPTEMSLIQKKNTNFDDHYPYPSSSTDYSGPLPCKPLLRSESAPVSIPTEVANSPGYSNRHNVPPSPPRRGSRGTAKIDRSTNAMHTGTNAERFFSLGKDEYRKNSGVKISANSSPQISISRSSSRSYQDYLDDTDFTCPFDVDDDDITDPGSRAESPYHGLLAETYESGGFFPIRKSHDAAVGALVQMLKKAPPLRQDFSTSQHLSKGGTNVETGNNNIQGPSHILESSRPASMMSSGIIATRKTTADALEEFHGYKEMKNLLLMRGSKHQI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01340 632 MobiDBLite consensus disorder prediction 372 389 - -
Spst3g01340 632 PANTHER UNCHARACTERIZED 3 629 IPR040182 GO:0000045
Spst3g01340 632 MobiDBLite consensus disorder prediction 372 394 - -
Spst3g01340 632 MobiDBLite consensus disorder prediction 406 451 - -
Spst3g01340 632 Gene3D HORMA domain 4 264 IPR036570 -
Spst3g01340 632 Pfam Autophagy-related protein 13 19 259 IPR018731 GO:0006914|GO:1990316
Spst3g01340 632 MobiDBLite consensus disorder prediction 559 591 - -
Spst3g01340 632 FunFam Autophagy-related protein 13b 13 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01340 Spst-Chr3 16813948 16818260 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01340 K08331 - gmx:100798585 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01340 3 16813948 16818260 Spst3g01340 3 16813948 16818260 ECH