Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01328 ATGGCACACTCCACTTCTCTCTTCTCTTTCTCTCTTTCTTCTTCTTCTCCTCTTCATTCATCTTCTCCACTATGTCTTTCAAAACCCCTCTCCCCTTCCTTCATTTCTACACTCCACAATTCAACCTCTCGCGCCAATTTCGCTGTTCGCTCCTCCTACTCCGAAATGGGCTCTTCCCCTGAGCCAATCAAATTCAGGAAGCCCGAGATTCCGTCCAGAGCTCACTTGGAACTTTCAATGAATGAAAATAACACGCCATCGTATAAATGGCGAAGGGTTTTGCTCAAAGTCAGCGGAGAAGCACTTGCAGGAGACCACACTCAGAACATTGACCCAAAGATAACCATGGCCATTGCAAGGGAAGTGGCAGCAGTGACTCGGCTTGGCATTGAGGTTGCACTAGTAGTTGGTGGGGGTAACATCTTCCGTGGATCCTCCTGGGCCGGAAGTAGTGGACTAGACCGCTCATCTGCTGATTATATTGGGATGTTGGCCACTGTCATGAATGCTATATTTCTTCAAGCAACAATGGAGAGTATTGGCATTCCTACCCGGGTGCAGACTGCATTTCGAATGTCTGAGGTTGCAGAACCATATATACGCAGAAGGGCTGTGCGGCATTTGGAAAAAGGAAGGGTTGTTATTTTTGCTGCTGGAACTGGAAATCCATTCTTTACCACGGACACTGCTGCAGCACTCCGATGTGCAGAGATTAATGCAGAGGTTGTACTAAAAGCGACAAACGTTGATGGAGTCTATGACGACGACCCAAAGCGTAATCCACAAGCACGTCTTCATGACACACTAACGTATCAGGAGGTAACTTCAAAAGATCTGTCAGTGATGGACATGACTGCCATAACTTTATGCCAGGAGAATAATATTCCAGTTGTTGTTTTCAATCTAAACAAACCTGGCAACATAGAGAAAGCTATTAAAGGGGAAAGAGTTGGCACTTTGATTGGGGCACACTGGAGTTCTACCGTATACGAACATGAAAATATTTGA 1008 0.4583 MAHSTSLFSFSLSSSSPLHSSSPLCLSKPLSPSFISTLHNSTSRANFAVRSSYSEMGSSPEPIKFRKPEIPSRAHLELSMNENNTPSYKWRRVLLKVSGEALAGDHTQNIDPKITMAIAREVAAVTRLGIEVALVVGGGNIFRGSSWAGSSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDDPKRNPQARLHDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNKPGNIEKAIKGERVGTLIGAHWSSTVYEHENI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01328 335 CDD AAK_UMPK-PyrH-Ec 91 322 IPR015963 GO:0005737|GO:0006221|GO:0033862
Spst3g01328 335 PANTHER URIDYLATE KINASE 73 325 - -
Spst3g01328 335 Hamap Uridylate kinase [pyrH]. 88 322 IPR015963 GO:0005737|GO:0006221|GO:0033862
Spst3g01328 335 NCBIfam UMP kinase 91 321 IPR015963 GO:0005737|GO:0006221|GO:0033862
Spst3g01328 335 FunFam Uridylate kinase 81 324 - -
Spst3g01328 335 Pfam Amino acid kinase family 92 301 IPR001048 -
Spst3g01328 335 SUPERFAMILY Carbamate kinase-like 88 321 IPR036393 -
Spst3g01328 335 Gene3D - 80 332 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01328 Spst-Chr3 16711702 16714261 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01328 K09903 - gmx:100781745 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01328 3 16711702 16714261 Spst3g01328 3 16711702 16714261 ECH