Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01313 ATGTGGGTTGGATGTTGGCCAGCGGGAATGCATCTGGAGAGGATCCAAGCTGCACCTCTTTTTACATATCATTACTTCCGTAAACCACGTCACATTGTTAAATCAGAGAAACGCAATAATAACAAGGTAAGTGCTTCAAGCAGAGAAGAAACAAAATCAGAATCAGAATTTCAATCAGAGTCCTCCTTTAAGAAAGTGGTGGAGAAGGGTGTACCGTGTAACGAATCCGTTGAAGGAAAAGTGCGTTGGGTAAGGTATCAGATAATAGGTAACGGTGCAGAGTTCGATTCTCCATTTGGAAGCCGAATCATTGTGTATGCTGATCACACCGCTTCCGCTCGCAGTCTTCGCTACAATGAAAACTTCATTGCCAATCATCTTCTTCCTTTCTACGGCAACACTCACACGTGCGACAGTTACGTGGGCAGCAGGACAACAAAAATGGTACACGAAGCAAAAGAGTACATTAAAAAATGCTTGGGTGGTCGGAAAGACGATGCACTCATCTTCTGTGGCTCTGGCACAACTGCAGCCATCAAGAGGCTGCAAGAAGTGATGGGGATCACTGTACCCTCTATTTTGAGGGAAAGGGTTTCCAAGAGCCTTAGCACAGAAGAAAGATGGGTGGTTTTTGTTGGACCTCATGAGCACCATTCTAACCTCCTTTCTTGGAGGCAAAGTTTAGCTGAGGTGGTAGAAATTGGTCTTGATCACAAAGGGTTGATAAACATGGATGCTCTAAAGCTACAACTTGAGGCCTACAAAGACGCCAATCGACCCATGTTGGGATCTTTCTCAGCCTGTAGCAATGTCACAGGAATCCACTCAGATACACGAGCAATTGCTCAGCTTCTTCATCAGTATAAAGCCTTTGCATGCTTTGATTTCGCAGCAAGTGGTCCATACGTGGAGATTAACATGAAGTCTGGGGAGAGTGATGGGTATGATGCAGTGTTCTTGAGTCCCCATAAGTTTCTTGGTGGTCCTGACTCTCCTGGGGTTCTCCTCATGAACAATGCTCTCTACCGATTGAGATCTTCCCCGCCATCAACTTGTGGAGGTGGAACTGTGGATTACGTTAATGGCTTCAACGAAAAGGATACACTATACCTGGAGAACATAGAGGAAAGAGAAAATGCGGGCACCCCTCCTATAATCCAGACAGTGAGAGCAGCATTGGCATTCTGGGTGAAAGAGTACGTCACCTACAAAGAGATTGAGAAACGTGAACAATTTTACATTAAAAAGGCACTTACGAGATTAATGTCCAACGCAAACATCGAGATTCTTGGAAACTTGGGCACCAAAAGACAAGCCATATTGTCATTTATCATTTATTCTACCACCAATAATAGTTCTTCCTCACCTGGTTGGGGCATTAAATGGCTAGAAAACAACCAGAAACAGGAAAAACAAAGAGAACTTAGTTTGTGGAAAGAGACAGAGAGCAAAAGAGGTAAACCACTTCATGGCCCTTTTGTTGCAACACTGCTGAGTGACCTATTTGGCATCCAAGCTCGTGGAGGGTGTGCTTGTGCTGGACCTTATGGCCACCAATTGCTCAGTATCAACAAATCAAAATCTCTTGCTATTAGATCAGCAATTCAAGAGGTATCTTCTCTCAATGTAAAATTTGTGATTCAAATGAACCTTTTATATAATCATCACGCAATACAAAATTGTTTATTACTTGAACAGGGTTACGTTGGAGTAAAACCTGGATGGATTAGAGTTAGTTTTCCGTATTACATGGAGGAGGAAGAATTTGAGTTCATCTTAACAGCGATAGAGTTTGTAGCAATCTATGGCCAACGCTTCCTTCCCTTGTATAGCTTCAATTTGAGAAACGGAAGTTGGAGAATGAAGAAAGAGCAACTTCAGGCTCTGATCAACAACAATAATTGCAATTTTCAGAAAACTACAGGGGAAGCAAAGAGTGATTTGAAAGCACTCAAATCAGGTGTGGGATATAACATTGGAACTAAACAAGTTAGTGTGTTAAGGAAATCATACCTAGATATAGCAAAGTATATTGCTAATCTTCTCCCCAAGTTCCCTTCTCAAGGCATACTCCATGAAGATGTAAATCCCAATGTTCTCTGTTTTAGAGTTTAA 2115 0.4227 MWVGCWPAGMHLERIQAAPLFTYHYFRKPRHIVKSEKRNNNKVSASSREETKSESEFQSESSFKKVVEKGVPCNESVEGKVRWVRYQIIGNGAEFDSPFGSRIIVYADHTASARSLRYNENFIANHLLPFYGNTHTCDSYVGSRTTKMVHEAKEYIKKCLGGRKDDALIFCGSGTTAAIKRLQEVMGITVPSILRERVSKSLSTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDHKGLINMDALKLQLEAYKDANRPMLGSFSACSNVTGIHSDTRAIAQLLHQYKAFACFDFAASGPYVEINMKSGESDGYDAVFLSPHKFLGGPDSPGVLLMNNALYRLRSSPPSTCGGGTVDYVNGFNEKDTLYLENIEERENAGTPPIIQTVRAALAFWVKEYVTYKEIEKREQFYIKKALTRLMSNANIEILGNLGTKRQAILSFIIYSTTNNSSSSPGWGIKWLENNQKQEKQRELSLWKETESKRGKPLHGPFVATLLSDLFGIQARGGCACAGPYGHQLLSINKSKSLAIRSAIQEVSSLNVKFVIQMNLLYNHHAIQNCLLLEQGYVGVKPGWIRVSFPYYMEEEEFEFILTAIEFVAIYGQRFLPLYSFNLRNGSWRMKKEQLQALINNNNCNFQKTTGEAKSDLKALKSGVGYNIGTKQVSVLRKSYLDIAKYIANLLPKFPSQGILHEDVNPNVLCFRV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01313 704 PANTHER CYSTEINE DESULFURASE 49 605 - -
Spst3g01313 704 Pfam Aminotransferase class-V 105 445 IPR000192 -
Spst3g01313 704 Gene3D - 123 355 IPR015421 GO:0003824
Spst3g01313 704 MobiDBLite consensus disorder prediction 36 55 - -
Spst3g01313 704 SUPERFAMILY PLP-dependent transferases 104 597 IPR015424 -
Spst3g01313 704 Gene3D Aspartate Aminotransferase, domain 1 373 606 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01313 Spst-Chr3 16552398 16557291 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01313 - - var:108325539 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01313 3 16552398 16557291 Spst3g01313 3 16552398 16557291 ECH