Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01312 ATGAGGATAGATCACCCCTTATTGACAGAGAAACCTGTGTTAGTCCAACCATGCAAGGATCAAAGCCATGGCCAGGACAAAATCAACAGCGAGGTTGGAGTGTTATCCAAACCAAGCACATCAGAAACATCTCACGACTTTTGCAACCACTCTGAGTCCTTCAGGAAGCTTGTGGAGATCGGTTTGCCGTGGAACGAGTCAGTGGTGGAAAAACTGTGTTGGTTGCGATCCCAAATCATTGGTTACGATGCAGAGTTTGATTCCCCATTTGGAAAAAGAAAAGTTGTCTATGCTGACCACACTGCTTCAGGCCGCAGCCTTCACTATAACGAGAATTTCATCATCAATCACCTTCTTCCTTTCTATGGTAACACGCACACATGCGACAGTTACGTGGGAAGCAGGACAACAAAAATGGTAAACGAAGCAAGTGATTACATTAAGAAATGTTTAGGTGGTGGGGAAGATGATGCACTTATATTATGTGGCTCGGGCACAACTGCAGCTATCAAGAGGCTGCAAGAAGTGATGGGGATCACTGTGCCCTCTATTTTGAGAGAAAGAGTTTTGAAGAGTCTGAACACAGAAGAAAGATGGGTGGTTTTTGTTGGACCACATGAGCACCATTCAAACCTTCTTTCTTGGAGGCAAAGTTTGGCTGAGGTGGTAGAGATTGATCTTGATGACGAAGGATTGCTCGACATGGATGCTCTAAGGATACAACTTGAGGCCTACAAAGATACCAACCGCCCCATGTTGGGATCATTTTCAGCTTGTAGCAATGTCTCGGGAATCTACTCAGATACACGTGCAGTTGCTCAGCTTCTTCATCAGTACAGAGCCTTTGCATGCTTTGATTTTGCTGCAAGTGGTCCATACGTGGAGATTGACATGAGGTCTGGGGAGAGTGATGGGTATGATGCAGTGTTCCTGAGTCCACATAAGTTTCTTGGTGGTCCTGACTCTCCAGGGGTTCTCCTCATGAACAAGGCCCTTTATCTGCTAGGATCTTCACCGCCGTCCACTTGTGGAGGTGGAACCGTGAGTTATGTCAATGGCTTTAATGAACAGGAAACATTATACCTGGAGAACATAGAGGAAAGGGAAACTGGGGGCACGCCTCCAATAACCCAGACAGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAATACATAAGCTGTGAAGAGATTGAAAAATGTGAACAACTGTACATCAACAAAGCACTTCAGAGGCTTGGCTCAAACCCCAACATTGAGGTTCTAGGAAACTTGAAGGCCAAGAGACAAGCTATATTGTCATTTCTGATTTACTCCACCACCAATTGTTCCTCAGCTGGTGAGTGGAGGGATGGAAACCAGAAAAATGAAGGGGAACTTGATTTGTGGGCAGAAACGGGGAACCAAAGAGGGAAACCACTTCATGGTCCTTTTGTTGCAACATTGCTCAATGACCTCTTTGGAATCCAAGCTCGTGGAGGGTGTGCTTGTGCTGGACCTTATGGCCACCAATTGCTCCACATCAACAAGCCTCAATCACTTGCCATTAGATCAGCAATTCAAGAGGGTTACATTGGAGTAAAGCCAGGGTGGACTAGAGTTAGTTTTCCTTACTACATGAGTGAAGAGGATTTTGAGTACATTCTGAAAGCCATAGAGTTTTTAGCTGTGTATGGCCAACGATTCTTTCCCCTTTATAGCTTCAATTTGAGAAATGGGAGCTGGAGGTTGAAGACAGAGAAAATTGAAGCTCTAACCAAGGAAGGAATTTGCAACTTTCCGAGTCATAATATTGCAGCTAAACAAGTTGGGGTGATGAAAAGGAGCGAATCATACTTTGAGGTGGCTAAATGTATTGCTACTAGCCTCCCAAAATTCCCTTCTCAGCGAATACTCGATGTGGAACTAGATCCAAAAATCTTCCGCTTTAGGCTACAGTTTCGGGTGCCTGGAAAATTGAAAGCGTTGCACTGTTATTTTATTCGCTTGACTAGTGCAAAGGCTTCTGCTCAGTATCTTGGTGTTCGGGTTTTCCACTAG 2037 0.4482 MRIDHPLLTEKPVLVQPCKDQSHGQDKINSEVGVLSKPSTSETSHDFCNHSESFRKLVEIGLPWNESVVEKLCWLRSQIIGYDAEFDSPFGKRKVVYADHTASGRSLHYNENFIINHLLPFYGNTHTCDSYVGSRTTKMVNEASDYIKKCLGGGEDDALILCGSGTTAAIKRLQEVMGITVPSILRERVLKSLNTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIDLDDEGLLDMDALRIQLEAYKDTNRPMLGSFSACSNVSGIYSDTRAVAQLLHQYRAFACFDFAASGPYVEIDMRSGESDGYDAVFLSPHKFLGGPDSPGVLLMNKALYLLGSSPPSTCGGGTVSYVNGFNEQETLYLENIEERETGGTPPITQTVRAALAFWVKEYISCEEIEKCEQLYINKALQRLGSNPNIEVLGNLKAKRQAILSFLIYSTTNCSSAGEWRDGNQKNEGELDLWAETGNQRGKPLHGPFVATLLNDLFGIQARGGCACAGPYGHQLLHINKPQSLAIRSAIQEGYIGVKPGWTRVSFPYYMSEEDFEYILKAIEFLAVYGQRFFPLYSFNLRNGSWRLKTEKIEALTKEGICNFPSHNIAAKQVGVMKRSESYFEVAKCIATSLPKFPSQRILDVELDPKIFRFRLQFRVPGKLKALHCYFIRLTSAKASAQYLGVRVFH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01312 678 SUPERFAMILY PLP-dependent transferases 89 552 IPR015424 -
Spst3g01312 678 Pfam Aminotransferase class-V 117 436 IPR000192 -
Spst3g01312 678 PANTHER CYSTEINE DESULFURASE 67 560 - -
Spst3g01312 678 Gene3D - 114 341 IPR015421 GO:0003824
Spst3g01312 678 Gene3D Aspartate Aminotransferase, domain 1 366 558 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01312 Spst-Chr3 16546683 16551160 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01312 - - gmx:100777453 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01312 3 16546683 16551160 Spst3g01312 3 16546683 16551160 ECH