Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01311 ATGGTGAGGTTTTTAGGGTTGACTCTTGGTTACGCAGAAGAACCCCGGGAAATAGCATCCAGATCGAACCTGACCAGCGAGTCTGGTGAAAATGGGTGGCTCATCAGGTTCTTTGACTCGGCGTTTTTCTGCGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGACCACGCCGGGGTGCGTGATTATCTCTGTAATAGAATGTATACTCTTCCGTTGCAAGGTGTTGAGAGTTATTTGTTCCAGATATGTTACATGATGATACACAAACCTAGCCCGTCCTTGGATAAATATGTGATAGATGTATGCTCTAAGTCACTTAAGATTGCTTTGAAGGTACATTGGTTCTTGTCAGCAGAGCTTGAGGATTCTGATGATAACGAAGGGATCAGTAGGATTCAGGACAAGTGTCAGATCGCCGCCACCTTGATGGGTGAGTGGCCACCTCTAATTAGGCCTCAAACTGAACCTCCAAGTCCTGGAGGAAAGAGCCAAGTTTTGAACAGGTTACTGTCATCAAAAAATCGCTTGTTATCACTAACATCCTCACCGCCTGGTCAGAAGTCTTTATCATTTTCACCTTCCTCAGGAAACAATTTGCATGAGGATGGGAAACCGCTGTCTCCTGATGAGAGCAAGATATTTAAGAAGTTTATGCCAGGCCCTAAGGTTAGAGATGCTTTACTTTTTCGGAAGTCAGTGGACAAAGATGATGATGGTCCTGAAAAGGATGGCTTTTTCAAGAGGCTTTTGAAAGATAGCAAAGGTGATGATGAACTGGGCCAAAAAATTCGTGATGCATTTCTGTTTAGGAAGTCATCTGTGAAAGATGATGAAGATTCTGAAAAAGATAATTTCTTTAAAAGGTTCTTAAGGGACAGCAGAGGTGACGATGAAGACTCAGAAAAGGATGGTTTCTTTCGAAGGCTCTTAAGGGACAGTAGAAGTGAAGATGAAGATGTAGCTTCAAGTTCAGAGGGATTATTTAAGAGATTGTTTCGTGATAGCAAGAATGATTCTGAGGACAGAGCACACACTAAAACAATAGAAGATGAAGATAAAGAGGGATTTTTCCGAAAGTTTTTCCGGGAGAAATCTGAAGATAGGAAGGATGGGATTGATAATAGAGATGCTGGTAATTTTGAAGAGAAATATGCCAAACATGCTGAAGAGGATGAAAAAGAAGGGTTTTTTCGGAAATTATTAAAGGATAAATTTGAGGACAAGAAAGATACAAATGATAAAATTGAAGACAGTACTACCAATGGTGAGGAAGAAGAGTCTTCTGAGTTTTCCTTGTTCAAAAGACTATTTCGTGTGCATCCTGAAGATGCAAAAAGTAGTCTGGCCAATGCAAACGGCAATAATGGTGGTTTAGTTGAGAGTAGTCCAGGTACAGAGAATTTTTTTCGTAAGTTGTTCAGAGATCGTGACCGTTCAATTGAGGATTCAGAGCTATTGGGTCCAAAAAGGCAGAAAGAGGTCTGTTGA 1491 0.4105 MVRFLGLTLGYAEEPREIASRSNLTSESGENGWLIRFFDSAFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGVESYLFQICYMMIHKPSPSLDKYVIDVCSKSLKIALKVHWFLSAELEDSDDNEGISRIQDKCQIAATLMGEWPPLIRPQTEPPSPGGKSQVLNRLLSSKNRLLSLTSSPPGQKSLSFSPSSGNNLHEDGKPLSPDESKIFKKFMPGPKVRDALLFRKSVDKDDDGPEKDGFFKRLLKDSKGDDELGQKIRDAFLFRKSSVKDDEDSEKDNFFKRFLRDSRGDDEDSEKDGFFRRLLRDSRSEDEDVASSSEGLFKRLFRDSKNDSEDRAHTKTIEDEDKEGFFRKFFREKSEDRKDGIDNRDAGNFEEKYAKHAEEDEKEGFFRKLLKDKFEDKKDTNDKIEDSTTNGEEEESSEFSLFKRLFRVHPEDAKSSLANANGNNGGLVESSPGTENFFRKLFRDRDRSIEDSELLGPKRQKEVC 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01311 496 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Spst3g01311 496 MobiDBLite consensus disorder prediction 178 213 - -
Spst3g01311 496 MobiDBLite consensus disorder prediction 410 431 - -
Spst3g01311 496 SUPERFAMILY ARM repeat 54 125 IPR016024 -
Spst3g01311 496 MobiDBLite consensus disorder prediction 178 202 - -
Spst3g01311 496 Gene3D - 48 139 IPR042236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01311 Spst-Chr3 16545002 16546492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01311 1 494 Lipid Metabolism Gene Families AT5G64070 61.877 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01311 K19801 - gmx:100784942 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01311 3 16545002 16546492 Spst3g01311 3 16545002 16546492 ECH
Spst3g01311 3 16545002 16546492 Spst9g01770 9 19567178 19577448 PCT