Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01302 ATGGCGGGTGCATGCAGCAGAACACCCATTTCCCTTCTTCCTCCGCGGAACCCCAAAGTCAGAATCCAGAATTCTCAGAGTAAAGTTCTTCAACTTCCACATAGGCGTCTGTTCCTCTTCTCTCTGCCCCTGTCTAGTTTCCTTCTCCTTCCTATTCCCAGCTTTGGTGATGGTAACGGTTCAATTATTGATAAATTTCAACATGGTTCTTCTTCACTTGCTGCCACAATGTATGACCCTATAAGTGCAGCTGAAAGAGACGCAAGTGCTTTACTTTCACAGCGAGTGTCTCAAGCCGTCGATTTGTTGGAGAAAGGGAGGGAATTGCAGGCGCAGGGTGACTTTACTGCCGCTCTTGGTTACTTTTCTCAGGTTATTGAAAGCTACAAAGACTTGGCATTCTCAGAGTATGCCAGAGTAGGAAGAGCATTGGCCCTGTATGAAGTTGGTGACAGAGAAGAAGCAATTGCAGAGATGGAGGACGTTTCAATATCTCTAAAAGGATATCCAGAAATACATGCTGCTCTTGCAGCAGCCTTATATGCAGATAAGCACGCCGCTTTGCTTGCTGAAAATCAGTTTGCCATTGCAACTCTTCTTGATCCCCATTTTACAGACCTTTCATATGTCAGAGACACAAAGCACTGGCCTCCAAGTTTGATCAGTTCTCTGCAGCACTTCATCACACTATCTTGA 696 0.454 MAGACSRTPISLLPPRNPKVRIQNSQSKVLQLPHRRLFLFSLPLSSFLLLPIPSFGDGNGSIIDKFQHGSSSLAATMYDPISAAERDASALLSQRVSQAVDLLEKGRELQAQGDFTAALGYFSQVIESYKDLAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEIHAALAAALYADKHAALLAENQFAIATLLDPHFTDLSYVRDTKHWPPSLISSLQHFITLS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01302 231 Gene3D Tetratricopeptide repeat domain 89 211 IPR011990 GO:0005515
Spst3g01302 231 PANTHER EXPRESSED PROTEIN 19 231 - -
Spst3g01302 231 Pfam Tetratricopeptide repeat 111 178 - -
Spst3g01302 231 SUPERFAMILY TPR-like 91 206 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01302 - - var:108334734 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01302 3 16434582 16437709 Spst3g01302 3 16434582 16437709 ECH