Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01254 ATGAGCTCGAGCAATTTGACCGGGTTTGTGTTGGCCGTGGTTTCCAGCGCTTTCATTGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTCCAACTCGCAAGTGTCAATGGCCCACGTGCAAGCGTTGGTGGCTATGGTTACTTGCTTCAACCCCTCTGGTGGGTCGGGATGATTACCATGATTGTTGGAGAGATAGCTAATTTTGTGGCGTACATTTATGCCCCTGCTGTGCTTGTTACTCCTCTCGGTGCTTTGAGTATAATTGTAAGTGCCGTTTTAGCTCATTTTCTCTTGAAGGAGAAGCTCCAGAAAATGGACGTGTTGGGTTGTCTTCTATGCATTGTGGGATCCACTGTTGTTGTGCTCCATGCGCCTGAAGAGAAGACTCTTAATTCTGTGCAAGAAATATGGGAATTGGCCATTCAACCTGCATTCCTCTCGTATACAGCCTCTGCCATTGCAGTGACATTGTTCTTGGTTTTGTATTGTGCTCCCCGTTATGGCCAGACTAATATTTTTGTTTATATTGGAATATGCTCGATAGTTGGGTCCTTGACTGTCATGAGTGTAAAAGCAATTGGCATTGCCATAAAACTTACAATAGAAGGCTCAAACCAGGCTTTCTACTTTCAGACATGGATTTTTACAATGGTTCTTGTCACCTGCGTCATTGTCCAACTAAATTACCTTAATATGGCATTGGATAATTTTAACACAGCAGTTGTTTCTCCAATCTATTATGCATTGTTCACAGCTTTTACAATATTAGCCAGTGCAATTATGTTTAAGGACTATTCTGGTCAAAGTATAAGCAGCATTGTGTCAGAGCTATGTGGTTTAATCACCATTTTATCAGGAACGACTTTATTGCACAGTACAAAAGAGCCAGATTCTCCAATCATTACAGATTTATATACACCTTTGTCTCCAAAAGTGTCATGGTACATCCAAGGCAATGGGGAACCTTGGAAACCGAAGGAGGAGGATGTGCCACCCTTTAATTTGATCACAATTGTACGGCAAGACCATTTCAAGTGA 1038 0.422 MSSSNLTGFVLAVVSSAFIGSSFIIKKKGLQLASVNGPRASVGGYGYLLQPLWWVGMITMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMDVLGCLLCIVGSTVVVLHAPEEKTLNSVQEIWELAIQPAFLSYTASAIAVTLFLVLYCAPRYGQTNIFVYIGICSIVGSLTVMSVKAIGIAIKLTIEGSNQAFYFQTWIFTMVLVTCVIVQLNYLNMALDNFNTAVVSPIYYALFTAFTILASAIMFKDYSGQSISSIVSELCGLITILSGTTLLHSTKEPDSPIITDLYTPLSPKVSWYIQGNGEPWKPKEEDVPPFNLITIVRQDHFK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01254 345 Pfam Magnesium transporter NIPA 5 295 IPR008521 GO:0015095|GO:0015693|GO:0016020
Spst3g01254 345 PANTHER UNCHARACTERIZED 4 296 IPR008521 GO:0015095|GO:0015693|GO:0016020
Spst3g01254 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01254 Spst-Chr3 16039686 16045478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01254 K22733 - gmx:100799756 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01254 3 16039686 16045478 Spst9g01850 9 24048265 24053592 ECH
Spst3g01254 3 16039686 16045478 Spst3g01254 3 16039686 16045478 ECH
Spst3g01254 3 16039686 16045478 Spst9g01850 9 24048265 24053592 PCT