Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01253 ATGGGGGGTCTTTGTTCAAAGTCTGCCAAAGGTGACAAGGTGTTTGCCAAAGCAGATGCATATTCTGATAACCATAAATCTGATGTCAAGAACCACAAGTCCACCATCATGTTGCCCAATGATTTGACAAGTGCAGGGGATCATGGAGTCGACAAGAAAAGGCAAGAAGGTGCTGCTGCACCTACAGGGACCGGTTCTGATGATTTCTACGATGGAATCCCACGGTTTCCTGATTCTTTTCCCCACAAGTCTAGGTCAGTAAGATCAAGGCAAGCTGTGGCAAAGGTCTCAGAGGTGAGTTTACGCCTGGGCAGAGCTGGTATTGATGTTTTGGACACTCTTGGGAGTAGCATGACAAATTTAAGTGCCGGTGGTTTTGTATCTGGTGCTGTGATGAAGGGGAATGAAATTGGCATTTTAGCATTTGAAGTCGCAAACACTATTGTCAAGGGTTTTAGTCTTATGGAATCTCTTTCAGCAAAAAGTATTAACCACTTAAAAGAAGAGGTTCTTCCATTAGAGGCTGTGCAAGATTTAGTGTCAAAGGATATAGATGAACTTCTAAGGATTGTTGCAGCTGACAAAAGGGATGAGTTGAAAGTCTTTTCCGATGAGGTAATTCGTTTTGGAAATCGATCAAAGGATCCTCAGTGGCACAACTTGGACCGATACTTTGAGAAAATTAGCAAAGAACTTCATTCCCCAAGACAATCAAAGGAGGAGGCTAAATTGCTAATGCAACAATTGATGACTTCGGTTCAGTTTACAGCTGAATTATACCATGAGTTACATGCTTTGGATAGATTTGCACAAGATTATCAGCATAAACGTGAAGAGGATGATAATTTGGGTGCAGCTCAAAATGGTGACGGCCTTTCAATCTTGAGGGCAGAACTTAAAAGTCAAAAGAAGCAAGTTAAACATTTGAAAAAAAAGTCACTTTGGTCCAGAAGTTTGGAGGAGGTTATGGAGAAGCTTGTAGAGATAGTTCAGTTTTTGCATTTGGAGATAAACAATGCCTTTGGCACTGCAGATGACCATAAACCATTAATTCAAACCATCAGCAATCGCCAAAGATTGGGTCCTGCGGGCCTTGCTTTGCATTATGCTAATATAGTGCTCCAAATTGATACTCTTGTTGCCAGATCCAGTTCTATGCCGGCAAATACAAGGGATGCATTGTATCAAAGCTTGCCTCCTAATATAAAATTAGCTTTGCGTTCCAAATTACCAAGCGTTCATGTTGTAAAAGAGCTTACCATATCAGATATTAAACAAGAGATGGAGAAAACATTGCATTGGCTGGTTCCAATTGCTACAAACACAGCCAAAGCACATCATGGTTTTGGTTGGGTAGGGGAGTGGGCAAGCACTGGCTCTGAGCTGAATAAGAAGACCATGAAGGCTGAAGTGATGAGGATTGAAACACTTCACCATGCTGATAAAGACAAAGTAGAAAATTATATTCTCGAACTTCTCCTATGGCTTCACCGCTTGGCCATCAAAAGTAAATCTGGTATTGATACAGGAGAAATGAGGTCTGCCTTAAAGTCCCATGTCAGCACTACCCCACAAACGGAAAATCAACAATCTACAAAAGTCTTACCACCATTGTTAACAAGTGACGAACAGCGAATGTTGCAAGATGTTAGTAATAAAATTTGTAGAAGAGGGATCAGTAAAAGCTTGGACTTTGACAGGGTGAAGATTGGATTGACAGATAATGGAAGACTTACCAAGAGTAGCAGTTATTCATCAACAAGTAAAAGCAAGGAATTTTCTTTTAATAGAATTTTGTCTAAGCTTCCTGTTATTGATTTTGTTATCGACAAAAAGAGAGCACTGGATGTGATTGACAGACTAGATGTGGACAGATAG 1878 0.4058 MGGLCSKSAKGDKVFAKADAYSDNHKSDVKNHKSTIMLPNDLTSAGDHGVDKKRQEGAAAPTGTGSDDFYDGIPRFPDSFPHKSRSVRSRQAVAKVSEVSLRLGRAGIDVLDTLGSSMTNLSAGGFVSGAVMKGNEIGILAFEVANTIVKGFSLMESLSAKSINHLKEEVLPLEAVQDLVSKDIDELLRIVAADKRDELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISKELHSPRQSKEEAKLLMQQLMTSVQFTAELYHELHALDRFAQDYQHKREEDDNLGAAQNGDGLSILRAELKSQKKQVKHLKKKSLWSRSLEEVMEKLVEIVQFLHLEINNAFGTADDHKPLIQTISNRQRLGPAGLALHYANIVLQIDTLVARSSSMPANTRDALYQSLPPNIKLALRSKLPSVHVVKELTISDIKQEMEKTLHWLVPIATNTAKAHHGFGWVGEWASTGSELNKKTMKAEVMRIETLHHADKDKVENYILELLLWLHRLAIKSKSGIDTGEMRSALKSHVSTTPQTENQQSTKVLPPLLTSDEQRMLQDVSNKICRRGISKSLDFDRVKIGLTDNGRLTKSSSYSSTSKSKEFSFNRILSKLPVIDFVIDKKRALDVIDRLDVDR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01253 625 Coils Coil 292 312 - -
Spst3g01253 625 PANTHER OS01G0873900 PROTEIN 1 622 IPR045021 GO:0045927
Spst3g01253 625 Pfam Domain of unknown function (DUF3475) 139 195 IPR021864 GO:0045927
Spst3g01253 625 Pfam Protein of unknown function (DUF668) 359 444 IPR007700 GO:0045927
Spst3g01253 625 MobiDBLite consensus disorder prediction 22 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01253 Spst-Chr3 16024799 16032618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01253 - - gmx:100804075 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01253 3 16024799 16032618 Spst3g01253 3 16024799 16032618 ECH
Spst3g01253 3 16024799 16032618 Spst9g01843 9 23465427 23474460 PCT