Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01248 ATGCAAGAGACGCTCCTCACTCTCCCTCTCTCCCACCACCAAGACATCCACATTCGCGCCAAGAAGAAGAAACCGCAACAACCAGGAACCGAACATAGCAGCAACAGCAACAGTAGCAGCGGCGGACACTCCACCACTCGCGTGTCGCGGCGCGTGAGTCCTGTCGGGGAGAAGTCTCTTCCGAACGGCGACATCTACAGCGGCACCCTGTCGGGAAACGCGCCGCACGGCACCGGGAAGTACCTCTGGTCCGATGGGTGCATGTACGAGGGGGAGTGGCGAAAGGGGAAAGCTTGTGGCAAGGGGAGGTTCTCGTGGCCCTCGGGCGCCACATACGAGGGGGAATTCAAGTCGGGTCGGATAGACGGGTTTGGATCCTTCATCGGCGTCGACGGCGACATGTACAAAGGCTCCTGGGTGGCCGACAGAAAGCACGGGTTCGGCGAGAAACGGTACGGCAATGGGGACGTCTATAAAGGTTGGTGGAGGTGCAACTTGCAGGAGGGGGAGGGGAGGTACACGTGGAGGAACGGGAACGAGTATGTGGGGGAGTGGAGGAGTGGTGTCATTTCGGGGAAGGGGTTTTTGGTGTGGGCAAATGGGAACCGTTACGAGGGGTTTTGGGAGAATGGTGTGCCTGTGGGAAAGGGTGTTTTCACGTGGTGTGATGGGAGCACGTGCGCGGGGAACTGGGGGAAGGAGTTTATGGAAGAGGCACGTGAGGAGAAGATGAAGAGGAGTTCGGTGGATGGGTGCAGGAGTGTGAGTTTTCCCAGGATTTGTATTTGGGAGTTGGATGGAGAAGCTGGGGACATCACCTGTGACATTGTTCACAATGCTGAGGCTTCTCTGTTCTACAGGGATGGTACCAGTACCAGTGAGTCTGAGAACGGTGGAGATGATATTATTATTAATAATAATAATGGGTGTGGGGTTCTTCAGAAGAGTCCTTGTTGGTCTCTTGATGGTTCTGGTGGTGACGTTAAGAAGCCTGGTCAAACTGTGTGCAGAGGGCATAAGAATTATGATCTTATCCTTAGTCTTCAACTGGGTATTAGATACACTGTTGCCAAGCATGCTTCTATAGTCAGAGAGCTTAGACCGGGGGATTTTGATCCCAAGGAGAAGTTCTGGACGAGGTTCCCTCTTGAAGGGTCTAAGTTTACACCCCAGCAGCATTCAGTGGACTTCAGGTGGAAAGACTACTGTCCCATGGTGTTCAGACATCTAAGGGAATTATTTGCCATAGATCCTGCGGATTACATGCTTGCTATTTGCGGAAGTGACACACTAAGGGAGATGTCTTCTCCGGGAAAAAGTGGAAGCATCTTTTATCTCACTCAAGATGACCGCTTCATAATTAAGACTGTCAGGAAGTCTGAAGTCAAGGTGCTCATTAGGATGCTTCCAAGCTACTACAAACATGTTTGTTTGTACAAGAACTCCTTGGTGACTGCTTTCCTGGGTGTGCATTGTGTTAAACCTGTTGGAGGTCAAAAGACCCGGTTTATTGTAATGGGCAATGTGTTTTGCTCCGAGTACCGGATCCACAAAAGGTTTGACCTGAAAGGTTCTTCTCATGGTCGAACAACGGATAAGCCAAGAGAGGAGATTGATGAGACTACCACTCTCAAAGACCTTGATCTTAATTTTGTCTTTCGCCTGGAACAGTCTTGGTTTCAAGAGCTTATACGGCAACTCGATAGAGACTGTGAGTTCTTGGAAGCAGAGGGAATCATGGATTACAGTCTTCTAATTGGCCTGCATTTTCGAGATGATTGCACGGTTGAGGAAATGAAAAGTTCACCTCGCAATTCGTATTCAGGCAAGAGAGACATGCTTGACGATGAGATGCTCACATGCCGGGGACCGCTGATCCGGCTGGGAATGAACATGCCTGCCAGAGCTGAGAGTGTGTGTAAGGCTGGATTGGATCAGCAAACGGGTAGTGGAAGTGGCAATTCTAGTTCTACCCCTTCGGAGAGTAGTAGCCAGATCTCTGATGTAATCCTCTACTTTGGTATCATTGACATTCTCCAAGACTATGATATAAGCAAAAAGATAGAACATGCATACAAGTCACTACAAGTGGACTCCACCTCTATATCAGCCGTTGATCCCAAGCTATACTCCAAAAGGTTCAGGGATTTCATACACAGAATCTTTGTAGAGGATAAATGA 2181 0.4966 MQETLLTLPLSHHQDIHIRAKKKKPQQPGTEHSSNSNSSSGGHSTTRVSRRVSPVGEKSLPNGDIYSGTLSGNAPHGTGKYLWSDGCMYEGEWRKGKACGKGRFSWPSGATYEGEFKSGRIDGFGSFIGVDGDMYKGSWVADRKHGFGEKRYGNGDVYKGWWRCNLQEGEGRYTWRNGNEYVGEWRSGVISGKGFLVWANGNRYEGFWENGVPVGKGVFTWCDGSTCAGNWGKEFMEEAREEKMKRSSVDGCRSVSFPRICIWELDGEAGDITCDIVHNAEASLFYRDGTSTSESENGGDDIIINNNNGCGVLQKSPCWSLDGSGGDVKKPGQTVCRGHKNYDLILSLQLGIRYTVAKHASIVRELRPGDFDPKEKFWTRFPLEGSKFTPQQHSVDFRWKDYCPMVFRHLRELFAIDPADYMLAICGSDTLREMSSPGKSGSIFYLTQDDRFIIKTVRKSEVKVLIRMLPSYYKHVCLYKNSLVTAFLGVHCVKPVGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPREEIDETTTLKDLDLNFVFRLEQSWFQELIRQLDRDCEFLEAEGIMDYSLLIGLHFRDDCTVEEMKSSPRNSYSGKRDMLDDEMLTCRGPLIRLGMNMPARAESVCKAGLDQQTGSGSGNSSSTPSESSSQISDVILYFGIIDILQDYDISKKIEHAYKSLQVDSTSISAVDPKLYSKRFRDFIHRIFVEDK 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01248 726 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 338 722 IPR002498 GO:0016307|GO:0046488
Spst3g01248 726 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 426 721 IPR002498 GO:0016307|GO:0046488
Spst3g01248 726 MobiDBLite consensus disorder prediction 29 52 - -
Spst3g01248 726 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 75 723 IPR023610 -
Spst3g01248 726 MobiDBLite consensus disorder prediction 1 71 - -
Spst3g01248 726 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 61 188 - -
Spst3g01248 726 SMART morn 133 154 IPR003409 -
Spst3g01248 726 SMART morn 156 177 IPR003409 -
Spst3g01248 726 SMART morn 110 131 IPR003409 -
Spst3g01248 726 SMART morn 179 200 IPR003409 -
Spst3g01248 726 SMART morn 87 108 IPR003409 -
Spst3g01248 726 SMART morn 64 85 IPR003409 -
Spst3g01248 726 SMART morn 202 223 IPR003409 -
Spst3g01248 726 SUPERFAMILY SAICAR synthase-like 338 722 - -
Spst3g01248 726 CDD PIPKc_AtPIP5K_like 341 721 - -
Spst3g01248 726 Gene3D - 55 95 - -
Spst3g01248 726 Gene3D - 188 256 - -
Spst3g01248 726 Gene3D - 141 187 - -
Spst3g01248 726 Gene3D - 96 140 - -
Spst3g01248 726 PIRSF PIP5K_plant 235 726 IPR017163 GO:0005524|GO:0016308
Spst3g01248 726 PIRSF PIP5K_plant 3 242 IPR017163 GO:0005524|GO:0016308
Spst3g01248 726 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 327 508 IPR027484 -
Spst3g01248 726 SMART PIPK_2 367 723 IPR002498 GO:0016307|GO:0046488
Spst3g01248 726 FunFam Phosphatidylinositol 4-phosphate 5-kinase 96 140 - -
Spst3g01248 726 Pfam MORN repeat 66 88 IPR003409 -
Spst3g01248 726 Pfam MORN repeat 112 134 IPR003409 -
Spst3g01248 726 Pfam MORN repeat 158 179 IPR003409 -
Spst3g01248 726 Pfam MORN repeat 181 203 IPR003409 -
Spst3g01248 726 Pfam MORN repeat 135 157 IPR003409 -
Spst3g01248 726 Pfam MORN repeat 89 110 IPR003409 -
Spst3g01248 726 Pfam MORN repeat 204 226 IPR003409 -
Spst3g01248 726 Gene3D - 509 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01248 Spst-Chr3 15970772 15974670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01248 48 725 Acyl Lipid Metabolism Gene Families AT1G21980 64.944 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01248 K00889 - gmx:100789188 1327.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01248 3 15970772 15974670 Spst9g01840 9 23408596 23412423 PCT