Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01226 ATGGGAGGAGCTTCTGCAGATCTTCACCACCATGAATCAGACATAGAGCTTATTGATGCTGAAAGGACTGAAACCAACAGCACAAAGTTAGGGGATTCAGAGTCAAAAGCTGGCAGTGATGTTGGACTTGACGGTGGCATCAAATCTCAGGATGAGGTTGAAGGACACTATGTTGAGGTCACCATGGACATTCAAGGTGACTCTGTGGCCTTACACAGTGTTAAAGCTTTTGGTGGTGTTGATGTGGTGGAAGAGGAGGGTGAGAAGTTGGGTTTGATGGGGAAGAGGCTTGAGAAAAAAAGATCCTTTGGTGCCTCTGTGGTTCAGAATGCTGCTATCCGCATGAAGCAGCTGAAGCGTTTGGCTTCTTTCTCCAAACCAGCACCAAAACACTTTGAAAGAACAAAGTCTGCTGTGGCTCATGCTCTCACGGGGCTCAAGTTTATCAGCAAGACCGATGGTGGTGCAGGATGGGGTGAGGTGGAGAAGCGGTATGCGAAGCTTACTGCTACCACTGATGGCTATCTTCCTCGTGCTCTCTTTGCTCAATGCTTAGGGTTGAACAAGGAGTCTGAGGCTTATGCAGAGAAGCTTTTTGATACTCTTGCTAGGCAGAGAGGTATTCAAGGGGGTTCCATTAACAAGATCCAGTTGAGGGAGTTCTGGGACCATATTTGTGACCAGAGCTTTGATACTAGGCTCAAAACATTCTTTGACATGGTTGATAAAGATGCAGATGGCAGAATCACCGAGGAAGAAATTAAAGAGATTATATGCCTTAGCGCCACTGCCAACAAACTGTCAAATATCCAGAAGCAAGCTGAGGAATATGCAGCTTTGATCATGGAAGAACTGGACCCTGATGACTCCGGCTACATCATGATAGACAGCCTGGAGACACTTTTGTTGCATGGACCAGAGGAAACTACAAGAGGAGAAAGCAAGAACCTGAGCCAAATGCTAAGCCAGAAGCTCAAGCCTACGTACGTGGACAGTGCTATTATGAGGTGGTATAGGGAGGCCAAGTACATTTTGCTGGACAATTGGCAAAGATCTTGGGTAATTGCACTGTGGATTGGCGTTATGTTAGGCCTATTTGTCTATAAATTTGTGCAATATCGGAGAAGAGCTGCCTATGAGGTAATGGGCCATTGTGTATGCATGGCAAAGGGTGCAGCAGAGACACTTAAATTGAACATGGCTCTTATCTTGTTACCTGTTTGCCGAAACACCATCACCTGGCTCAGAAATAAGACCAAACTAGGTGCTGTAGTTCCTTTTGACGACAACATCAACTTCCACAAGGTAATAGCTGTGGCAATAGCAATTGGTGTTGGTATACATGCCATCTATCATCTTACTTGTGATTTTCCTCGCCTTCTTCATGCAAGTGATGAAAAGTACAAACTGATGAAACCCTTTTTCGGAGACAGACCATCAAATTATTGGTATTTTCTCAAATCATGGGAAGGAGTAACTGGTATAATAATGATTGTGCTAATGGCAATAGCTTTTACATTGGCCAACCCTGCATTCAGGAGAGGCCGGACCAAACTACCCAAACCCTTCAACAAACTCACAGGTTTCAATGCCTTTTGGTATACTCATCATCTCTTCGTGTTTGTCTATGCCCTGTTGGTTGTGCATGGAATCAAACTGTACTTGACTAAGGAATGGTACAAGAAAACGACATGGATGTATCTGGCAGTTCCCATCACCATTTATGCATTGGAAAGACTGATTAGAGCACTCAGATCAAGCATTAAGTCTGTCAAAATATTGAGGGTGACTCTTTATCCTGGAAATGTGTTATCACTTCAAATGTCAAAGCCGCAGGGGTTTAGCTACAAAAGTGGACAATACATGTTTGTCAACTGTGCTGCTGTCTCTCCATTCGAATGGCATCCATTTTCCATAACTTCAGCCCCTGATGATGATTACCTTAGCGTTCACATAAAAGTAATTGGTGATTGGACCAGAAGTCTGAAAACCAAATTCTCACAGGCATGCCAACAACCCCTCAATGGGCAGAGTGGACTTCTAAGAGCTGAATGCTTGAAAGGAGATAACAGTTCAATATGTTTCCCGCGAGTTCTGGTGGATGGACCGTACGGGGCTCCAGCACAGGACTACAGGGAGTACGAGGTGGTTCTGCTGGTGGGGCTAGGAATAGGGGCAACCCCAATGATAAGCATTCTGAAGGACATGGTAAAGAGGTTGAAGGAGATAGAGGAGGAAGAGGGGACAATGGAGGAGGGAAAAGGAGGGAAATCACCACAGCAGAAGAGTGGTGGTGATGAGTTTAAGACAAGGAGGGCATACTTCTACTGGGTGACGAGGGAGCAAGGTTCCTTCGACTGGTTCAAAGGGGTGATGAACGAGGTCGCAGAAGAGGATCGAAGGAAGGTGATAGAACTCCACAGTTACTGCACCAGTGTGTACGAAGAAGGTGACGCTCGTTCTGCACTCATTGCCATGTTGCAGTCCATCAACCATGCCAAGCATGGTCTCGACATTGTCTCTGGCACGCGCGTCATGTCTCACTTCGCCAAACCCAATTGGCGTAGTGTTTACAAGCGCATTGCGCTTAATCATCCAAATGCTCGTGTTGGGGTGTTTTACTGTGGGCCATCAGCTCTCACCCATGAGCTTCGTCAGCTAGCATTGGATTTCTCTCACAACACATCCACCAAGTACGATTTCCACAAAGAAAATTTCTGA 2721 0.4572 MGGASADLHHHESDIELIDAERTETNSTKLGDSESKAGSDVGLDGGIKSQDEVEGHYVEVTMDIQGDSVALHSVKAFGGVDVVEEEGEKLGLMGKRLEKKRSFGASVVQNAAIRMKQLKRLASFSKPAPKHFERTKSAVAHALTGLKFISKTDGGAGWGEVEKRYAKLTATTDGYLPRALFAQCLGLNKESEAYAEKLFDTLARQRGIQGGSINKIQLREFWDHICDQSFDTRLKTFFDMVDKDADGRITEEEIKEIICLSATANKLSNIQKQAEEYAALIMEELDPDDSGYIMIDSLETLLLHGPEETTRGESKNLSQMLSQKLKPTYVDSAIMRWYREAKYILLDNWQRSWVIALWIGVMLGLFVYKFVQYRRRAAYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNKTKLGAVVPFDDNINFHKVIAVAIAIGVGIHAIYHLTCDFPRLLHASDEKYKLMKPFFGDRPSNYWYFLKSWEGVTGIIMIVLMAIAFTLANPAFRRGRTKLPKPFNKLTGFNAFWYTHHLFVFVYALLVVHGIKLYLTKEWYKKTTWMYLAVPITIYALERLIRALRSSIKSVKILRVTLYPGNVLSLQMSKPQGFSYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIKVIGDWTRSLKTKFSQACQQPLNGQSGLLRAECLKGDNSSICFPRVLVDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVKRLKEIEEEEGTMEEGKGGKSPQQKSGGDEFKTRRAYFYWVTREQGSFDWFKGVMNEVAEEDRRKVIELHSYCTSVYEEGDARSALIAMLQSINHAKHGLDIVSGTRVMSHFAKPNWRSVYKRIALNHPNARVGVFYCGPSALTHELRQLALDFSHNTSTKYDFHKENF 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01226 906 Pfam Ferric reductase NAD binding domain 714 888 IPR013121 GO:0016491
Spst3g01226 906 ProSiteProfiles EF-hand calcium-binding domain profile. 229 264 IPR002048 GO:0005509
Spst3g01226 906 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 581 710 IPR017927 GO:0016491
Spst3g01226 906 FunFam Respiratory burst oxidase homolog A 132 250 - -
Spst3g01226 906 ProSitePatterns EF-hand calcium-binding domain. 242 254 IPR018247 -
Spst3g01226 906 Pfam Respiratory burst NADPH oxidase 132 232 IPR013623 GO:0004601|GO:0050664
Spst3g01226 906 SUPERFAMILY Riboflavin synthase domain-like 590 707 IPR017938 -
Spst3g01226 906 MobiDBLite consensus disorder prediction 7 29 - -
Spst3g01226 906 PANTHER NADPH OXIDASE 194 906 - -
Spst3g01226 906 Gene3D Translation factors 577 678 - -
Spst3g01226 906 Gene3D - 132 250 - -
Spst3g01226 906 MobiDBLite consensus disorder prediction 745 765 - -
Spst3g01226 906 FunFam Respiratory burst oxidase homolog A 577 669 - -
Spst3g01226 906 FunFam Respiratory burst oxidase protein A 705 906 - -
Spst3g01226 906 Pfam Ferric reductase like transmembrane component 391 547 IPR013130 -
Spst3g01226 906 SUPERFAMILY EF-hand 160 306 IPR011992 -
Spst3g01226 906 Pfam FAD-binding domain 589 707 IPR013112 GO:0016491
Spst3g01226 906 MobiDBLite consensus disorder prediction 1 48 - -
Spst3g01226 906 SFLD NADPH oxidase subgroup (NOX) 129 906 - -
Spst3g01226 906 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 712 906 IPR039261 -
Spst3g01226 906 PRINTS Cytochrome B-245 heavy chain signature 437 455 IPR000778 GO:0016020|GO:0016491
Spst3g01226 906 PRINTS Cytochrome B-245 heavy chain signature 529 549 IPR000778 GO:0016020|GO:0016491
Spst3g01226 906 PRINTS Cytochrome B-245 heavy chain signature 696 709 IPR000778 GO:0016020|GO:0016491
Spst3g01226 906 PRINTS Cytochrome B-245 heavy chain signature 719 736 IPR000778 GO:0016020|GO:0016491
Spst3g01226 906 Gene3D - 705 906 IPR039261 -
Spst3g01226 906 CDD NOX_Duox_like_FAD_NADP 593 906 - -
Spst3g01226 906 SFLD Ferric reductase subgroup (FRE) 326 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01226 Spst-Chr3 15758877 15764128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01226 49 906 Miscellaneous Gene Families AT5G51060 65.212 0.0 1178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01226 K13447 - gmx:100808271 1580.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01226 3 15758877 15764128 Spst3g01226 3 15758877 15764128 ECH