Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01213 ATGGAACATAACAGTAATGGGGCAAAGATCAAAAGCACTATTCTTCACCATCTCTTTGAGAAGCAGAGACAGAGCCCTTACTATGACAATCTCTGTCGCCCTGTTTCAGATTTGCTTCCATTCATTGCCAATGGGATCAGAGGTCTCACTACCAATCCAGCGATTTTTGAGAGAGCTATTTCATCCTCAAATGCCTACGATGAACAGTTGAGGAAATTGGTAGAGGCAGGGAAAGACATAGAATGTGCCTACAGGGAATTGGTTGTGAAAGACATACATGATACCTGCAAACTCTTGGAGTCAATTTACAATGATTCAGATGGGGTGGATGGATATGTATCTGTTGCAGTTTCCCCCAAGCTAGCAAGTGATACCAAGGGGACTATTGAAGAGGCAAAATGGCTTCATAAGATGGTTGGGTGTTCAAACGTTTACATTAAAATTCCTGCAACTGATGAATCCATCCTTTCTATGAAGGAGGTTATTTCTCTGGGGATAAGTGTAAATGCCACTCTCATATTCTGCCTCCCTAGATATGAAGCAGTGGTTGATGCTTACTTGGATGGCCTTGAGGCTTGTGGCAGGACTGATCTCTCTAAGGTTTCTAATGCAGCAGCGTTCTATATCAGTAGAGTGGATACAAAACTTGACAAAAAACTTGAGCAAATAGGTACCTCTGAGGCTCTTGATCTCAAAGGAAAGGGTGCGGTTGCTCAAGCTGTCTTAGCTTACCAACTTTATCAGAAAAAGTTTTCTGGTCCAAGATGGAAACACTTGGAGAAGAGAGGTGCCAAGAAGCAGAGGTTGATGTGGGCTTCAACAAATGTGAAAAATCCAGCTTACCCTGACACATTTTATGTTGATTCTCTCATTGGACCAGATACGATTTCAACCATAGCAGACCAAGCTCTTAAAGCATTCATGGACCATGGTGTTCTTTCAAGAACTCTTGATGCAGAAGTATCAGGGGCTCAAGACATTTATAATGCAATTGAGAAGTTGGGGATTGATTGGCGTTCTGTTGGATCAGAACTGGAACATGAGGTGCTGGGTTCTTTCACAAAAAGCTTTGACAATGTGCTTCAATGCATTCACAAGAAAACTCTAGTACAAGTCTAA 1119 0.42 MEHNSNGAKIKSTILHHLFEKQRQSPYYDNLCRPVSDLLPFIANGIRGLTTNPAIFERAISSSNAYDEQLRKLVEAGKDIECAYRELVVKDIHDTCKLLESIYNDSDGVDGYVSVAVSPKLASDTKGTIEEAKWLHKMVGCSNVYIKIPATDESILSMKEVISLGISVNATLIFCLPRYEAVVDAYLDGLEACGRTDLSKVSNAAAFYISRVDTKLDKKLEQIGTSEALDLKGKGAVAQAVLAYQLYQKKFSGPRWKHLEKRGAKKQRLMWASTNVKNPAYPDTFYVDSLIGPDTISTIADQALKAFMDHGVLSRTLDAEVSGAQDIYNAIEKLGIDWRSVGSELEHEVLGSFTKSFDNVLQCIHKKTLVQV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01213 372 PIRSF Trnald_Bac_Plnt 4 371 IPR004732 GO:0004801|GO:0005737|GO:0006098
Spst3g01213 372 Pfam Transaldolase/Fructose-6-phosphate aldolase 43 362 IPR001585 GO:0005975
Spst3g01213 372 Gene3D Aldolase class I 14 368 IPR013785 -
Spst3g01213 372 CDD Transaldolase_like 25 358 IPR004732 GO:0004801|GO:0005737|GO:0006098
Spst3g01213 372 PANTHER TRANSALDOLASE 31 367 IPR001585 GO:0005975
Spst3g01213 372 SUPERFAMILY Aldolase 22 367 - -
Spst3g01213 372 Hamap Transaldolase [tal]. 1 372 IPR004732 GO:0004801|GO:0005737|GO:0006098
Spst3g01213 372 NCBIfam transaldolase 38 362 IPR004732 GO:0004801|GO:0005737|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01213 Spst-Chr3 15680871 15682909 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01213 K00616 - gmx:100811673 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01213 3 15680871 15682909 Spst3g01213 3 15680871 15682909 ECH