Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01190 ATGGAAATAGCAAGTGTTTTGTGGCTCCATCATCTCTGTGGGATTACTCATACTCTGAACTGTTTGGTCGCAAGATCATGCTCTGATACCATGTCAGAACAGAGACTGCGGGTTTTGGTCAAGTACGAGTTTAGAGTTGCTTACTTATCTTTTGCCCAACAAATAGTTGAAGAGTATTCTGAGAAAATATTTATTTCCCGGACGAAGAAAAGCCATCCTACCCTTTCACTAGCACAACAGGTTCTGGAAAGCATCTGTGCAAATGACAAGAAAGCAGTGTACGAGCATATTGTTAAGTCGGATGTTGGCGTCAATGCCATCAATTGGCAATCGTTGTCTGGAGACTCTCTCCGCGTGGCTTCTTCAAGTAACTTAAACATTGCATCTCAGGCTGAAAATCAGCTCATTGAGGACATACAAGATGGCTCTAGCGCGCTTCACCTGGCTTGCCTAACTAGTGATATTGGCATGGTGGAGCTTCTCCTACAGCTTGGCGCAGATATAAATGCTTCTGATTCTGGAGGCCGGACACCACTTCATTGTTGTATTATCAGAGGGAAGACTGCAGCTGCAAAATTGCTTATCTTGAGGTAA 594 0.4394 MEIASVLWLHHLCGITHTLNCLVARSCSDTMSEQRLRVLVKYEFRVAYLSFAQQIVEEYSEKIFISRTKKSHPTLSLAQQVLESICANDKKAVYEHIVKSDVGVNAINWQSLSGDSLRVASSSNLNIASQAENQLIEDIQDGSSALHLACLTSDIGMVELLLQLGADINASDSGGRTPLHCCIIRGKTAAAKLLILR 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01190 197 ProSiteProfiles Ankyrin repeat region circular profile. 141 172 - -
Spst3g01190 197 PANTHER CENTAURIN/ARF 54 196 IPR045258 GO:0005096
Spst3g01190 197 Gene3D - 25 197 IPR036770 -
Spst3g01190 197 SUPERFAMILY Ankyrin repeat 84 195 IPR036770 -
Spst3g01190 197 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
Spst3g01190 197 Pfam Ankyrin repeats (many copies) 143 195 IPR002110 GO:0005515
Spst3g01190 197 SMART ANK_2a 141 170 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01190 Spst-Chr3 15408589 15410904 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01190 K12489 - gmx:100792517 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01190 3 15408589 15410904 Spst3g01190 3 15408589 15410904 ECH