Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01176 ATGGCCGAGATTCAGCCGCCGGAGGGGCAAATAAACGGTGCTAGCGGAACCCTAGTTCTTCACTCGTCTGAGCCCGCCATCGGATCCAAACGACAGCGGCGGCCAAGCGTCAGATTGGGTGACATAGGCGGGGACCAGCCCTATGATTCCCACGCGCGTCGCAACGCCAAGCCGTGGAAACTTGCCTTCGACAGCCACCATCATCACCACCACCGCAACAAGGACAAGGACCCAGGTAAACCCTCCAAGACCCGTCCTTTAACGAACCTGAGCGAGTTTAACGAAACCCTAGAAGGCTCGAACGAGCAAGCGGGGAACGTCGACTCCGTTGCAATTGGCAGCTGGAAGGTGAAGGAGTCTAAGAAGAGGGGCTCCGTCGCCACCAAAAGAGTCAGATCGAATTGGGTTTCGCGAATCGAGGACGGCGGTGGTGACAATGGTGGCGGGGAAGGAGAGGTAGAGAAATACAATAACGGGGACGAAGATGGAGAGGATGATGATGGGTATCGGGAATTTGAGGTGGAGAATTCGGAGAGCCCTTTGAAGGAACAAAGCCCTATGCATAGTATGGAGAATTTGGGGGTTGATGGGCATAGGAGGGTTTTTAAGGGTAGGGAAAGGGAGCAACAACATGATGGGGTTGAGCTATCTGCACCGTCTGATACTGATGTTAGGGATTGGAAGTGTGGGGATAGGAATAATGAGAATGGTGGTGGAAGGGTTAGGGGTGGTGAAGATGGGGTTAGGGTTTGGCTTAATGGGCTGGGGTTAGGGAGATATGCGCCTGTGTTTGAAGTGCATGAGGTGGATGATGAGGTTTTGCCCATGTTGACTCTAGAGGATCTCAAGGATATGGGGATTTGTGCTGTTGGATCCAGGAGAAAAATGTACACGGCCATTCAGAAGCTCGGGAAGGGCTTCTCCTGA 927 0.5318 MAEIQPPEGQINGASGTLVLHSSEPAIGSKRQRRPSVRLGDIGGDQPYDSHARRNAKPWKLAFDSHHHHHHRNKDKDPGKPSKTRPLTNLSEFNETLEGSNEQAGNVDSVAIGSWKVKESKKRGSVATKRVRSNWVSRIEDGGGDNGGGEGEVEKYNNGDEDGEDDDGYREFEVENSESPLKEQSPMHSMENLGVDGHRRVFKGREREQQHDGVELSAPSDTDVRDWKCGDRNNENGGGRVRGGEDGVRVWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGICAVGSRRKMYTAIQKLGKGFS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01176 308 MobiDBLite consensus disorder prediction 47 62 - -
Spst3g01176 308 MobiDBLite consensus disorder prediction 1 106 - -
Spst3g01176 308 Gene3D - 243 303 IPR013761 -
Spst3g01176 308 MobiDBLite consensus disorder prediction 135 191 - -
Spst3g01176 308 PANTHER SCP160 244 305 - -
Spst3g01176 308 SUPERFAMILY SAM/Pointed domain 246 303 IPR013761 -
Spst3g01176 308 MobiDBLite consensus disorder prediction 205 226 - -
Spst3g01176 308 ProSiteProfiles SAM domain profile. 243 306 IPR001660 GO:0005515
Spst3g01176 308 CDD SAM_superfamily 248 302 - -
Spst3g01176 308 MobiDBLite consensus disorder prediction 84 106 - -
Spst3g01176 308 SMART SAM_4 240 306 IPR001660 GO:0005515
Spst3g01176 308 MobiDBLite consensus disorder prediction 157 172 - -
Spst3g01176 308 Pfam SAM domain (Sterile alpha motif) 247 303 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01176 Spst-Chr3 15267176 15268102 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01176 - - gmx:100789887 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01176 3 15267176 15268102 Spst3g01176 3 15267176 15268102 ECH