LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst3g01170	ATGCAGCAGCATCAGGCGGCACCGCCGCCACCGGACAATCCAGATTCCGCCGACGCCTTCGCTCCGTCGCTTGTCAGAACTTATCGCGTCTGGCAAGGCAGTAACGTGTTTCTTTTCGGAGGGAGGCTTATATTTGGGCCTGATGTTAAATCTATATTTATATCGATTTTTCTTATTATTGTTCCCATCGCTGTATTCTGCGCTATGGTAGCGAGGAAACTGTTAGACGATTTTCCTCATCACTCTGGATGGTCAATAATGGGTGTGGTTATTGCTCTCACACTGTTTGTCCTAATCACCCTTGTAGTGACCTCAGGAAGAGATCCTGGGATAGTACCTCGTAATTCTCAGCCTCCGGAGCCAGATGATTATCAGTGGACTGAGAATAGCAGCAATGGACAACTTTCTTTGTCACGACTTCCACGAACAAAGGATGTAATAGTTAATGGTATAACAGTGAAAGTCAAATATTGTGATACTTGCATGCTCTACAGACCCCTCCGTGCTTCTCACTGTTCAGTCTGTGATAACTGCGTAGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGTATTGGACTGCGAAATTACCGGTTCTACTACATGTTTGTTTTCTCAGCCACTCTGCTTTGCTTATATGTACATGCCTTTTGCTGGGTCTACATTGTAAGGATTAAGGACTCCGAGAAAATATCAATTTGGAGAGCAATGTCCAAATCCATAGCTTCCATTGCACTAATAATCTACACCTTCGTCTGTGTTTGGTTTGTTGGCGGCCTCACTGTTTTCCACACGTACCTCGTCAGCACAAACCAGTCTACTTACGAAAATTTTAAATACCGGTATGACCATCAAACGAACCCATACAACAGAGGGGTACTTAACAACTTCAAAGAAGTATTCTGCTCTAGAATTCCTCCTTCCAAGAATAATTTTAGGTCTAAGGTTCCAAGGGAGCCATTAGACTCGTATCACAGAACGGATATTAGGCCCTTAAGCCCAATGATGAAAAGAACCATTAGGCATATGGAATTATTAGCAGGGAATTCAGTTTATAATGAGCAAGAAGAGGAGGAAAGTCATTACAGAGATGGGTCTGAGAATGAAGCACGTAGCAAGGATGGTGAAAGCAAAGATAGTGGATTGACCGATAAGTCCCTGGATTTAAGCAGGATCCTTCACACAGAAGGAGTGGAGGGCCAAGAAAGTTCACTTGGAAGACACCCTCCATGTGAAACAACTCCACAAGTTCCTGACAGCATAATCGAAGTTGGGCAATAA	1284	0.44	MQQHQAAPPPPDNPDSADAFAPSLVRTYRVWQGSNVFLFGGRLIFGPDVKSIFISIFLIIVPIAVFCAMVARKLLDDFPHHSGWSIMGVVIALTLFVLITLVVTSGRDPGIVPRNSQPPEPDDYQWTENSSNGQLSLSRLPRTKDVIVNGITVKVKYCDTCMLYRPLRASHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCLYVHAFCWVYIVRIKDSEKISIWRAMSKSIASIALIIYTFVCVWFVGGLTVFHTYLVSTNQSTYENFKYRYDHQTNPYNRGVLNNFKEVFCSRIPPSKNNFRSKVPREPLDSYHRTDIRPLSPMMKRTIRHMELLAGNSVYNEQEEEESHYRDGSENEARSKDGESKDSGLTDKSLDLSRILHTEGVEGQESSLGRHPPCETTPQVPDSIIEVGQ	427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst3g01170	427	PANTHER	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	57	321	-	-
	Spst3g01170	427	MobiDBLite	consensus disorder prediction	349	427	-	-
	Spst3g01170	427	MobiDBLite	consensus disorder prediction	355	393	-	-
	Spst3g01170	427	ProSiteProfiles	DHHC domain profile.	156	206	-	-
	Spst3g01170	427	Pfam	DHHC palmitoyltransferase	155	281	IPR001594	GO:0016409

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst3g01170	Spst-Chr3	15245105	15248367	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst3g01170	89	318	Lipid Metabolism Gene Families	AT4G22750	30.328	9.30e-18	81.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst3g01170	-		-	gmx:100788304	704.131

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst3g01170	3	15245105	15248367	Spst3g01170	3	15245105	15248367	ECH