Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01168 ATGGCCATGCATCGCGAGTCTTGGGCTTTTGTGTTCGGTCTTTTGGGCAACATCATCTCCTTCGGAGTGTTCCTTGCTCCATTGCCAACCTTTTACCAAATCTACAGGAAGAAATCCACTGCAGGGTTTCAGTCACTACCTTATGTTGTTGCACTGTTCAGTGCAATGCTTTGGATTTACTATGCATTCGTGAAAAGGGAAGCTGCTCTCCTTCTCATTACCATTAACACGTTTGGAATTGTTGTGGAATCAATTTACCTTGCAATCTTCCTTTGTTATGCCCCAAGGAAGCCTAGGCTTACAACCATCAAGCTTCTTCTCTTGCTGAATGTGTTTGGCTTCGGAGCCATGCTTCTATCAACTCTCTACCTGTCAAAGGGAGCGAAGCGTCTCGCTATCATAGGATGGATTTGCCTTGTTTTCAACATCAGTGTCTTTGCTGCACCTCTCTTCATTATTAGGCGAGTCATTAAGACAAGGAGCGTGGAATACATGCCATTTACTTTGTCCATGTTTTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAGGGATTATTACGTTGCTCTCCCAAACACACTCGGGTTTCTCTTCGGCATAATTCAGATGGTGATGTATTTGATCTACAGAAACGCCACCCCAGTGGCACTGGAGGAGCCAGTGAAGGCTCAAGAATTGAATGGCCACATCATTGACGTTGTGAAGATGGGAGACCCGAACCATGCAGCTACTGGTCATGGTGGTGTTGGCAAAGTCTGA 771 0.454 MAMHRESWAFVFGLLGNIISFGVFLAPLPTFYQIYRKKSTAGFQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIVVESIYLAIFLCYAPRKPRLTTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFIIRRVIKTRSVEYMPFTLSMFLTINAVMWFFYGLLLRDYYVALPNTLGFLFGIIQMVMYLIYRNATPVALEEPVKAQELNGHIIDVVKMGDPNHAATGHGGVGKV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01168 256 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Spst3g01168 256 PANTHER RAG1-ACTIVATING PROTEIN 1 14 217 IPR047664 -
Spst3g01168 256 FunFam Bidirectional sugar transporter SWEET 10 99 - -
Spst3g01168 256 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Spst3g01168 256 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Spst3g01168 256 Gene3D - 129 220 - -
Spst3g01168 256 Gene3D - 11 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01168 Spst-Chr3 15224447 15226460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01168 1 240 Miscellaneous Gene Families AT5G50800 57.676 3.71e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01168 K15382 - gmx:100810946 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01168 3 15224447 15226460 Spst3g01168 3 15224447 15226460 ECH
Spst3g01168 3 15224447 15226460 Spst9g02162 9 47257492 47259565 PCT