Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01155 ATGTCTTCTGAAATCTTAGAAAACGAGAAACCTCATGGGGAAGAAGAAGCCCAAGCTGAAGAGAATCACACCGAACAAGAGGATAATTCGGTGAAGGACGATGTGAAGGAGAAAGGCGAAGAGACAAAGGATCGGGTAGAAGAAGAGAAGAATGAAGAGGAAAAAGAGATTGAGGAGCGCGGCGAAGCGAAGTCAAATAAGTCAACGAAAGAAAGCGGTTACGCTACGCCAGTCAGTGAGAGACCAACTAGGGAGAGGAAAACGGTGGATAGGTACACTGTTTCTTCGCCTGATAAGTTTCCCAAATATTCCTCTTTCAAACCTTTGTCAATTGAAAAGGGCAGCGGTACGCAGCTCAAAGATATCCCAAATGTGGCTTTCAAGTTATCAAAGAGAAAAGCTGACGACAACCTGCGCGCGCTTCATAGTATACTCTTTGGGAAAATAGCAAAGGCAAACATGATAAAGAGAAATATAGGACTGTTTTCTGGCTATGTGTGGGCTGAGAACGAGGAAAAACAGAGGGCAAAAACAAGGGAGAGGATTGACAAATGTGTAAAAGAAAAGTTGGTGGATTTTTGTAATGTGCTTAACATTCCAATAAATAAGACCAGTATGAAGAAGGAGGAACTGTCTGCTAAGTTGTTTGAATTTTTGGAGTCCCCGCATGCTACAACTGATGTTCTTCTTGCTGATAAGGAAAAGAAAGGTAAAAAACGAGCCAGAAAGCAAATCCCAAACAAATCTTCTGGGGAAGGATCTGAAGCACCTGCCAAGAAGCAAAAGAAGCCCTCACAAGTTGGGAAAAAGCAAAAACAGTCTTCTGACATCGAGGACAGTGATATGTCCGAAGCTTCAGACAAAAAGGTTGATTCTGAGGAAGACGATGTCGTAGGGTCAAAAAGTGAAAGTGATCATGATGACGAAAGCATGTCAGAGAAAGAGGAAGAAGATAAAGAAAATGCTCACAAACGGTCTTCGAAAAAGACCCTGAAGGAAGATCAAGCAACACATGTAAAGAAGACGACTATTGTAAAGGGTGCCAAGAGCAACGAAAAAACTTTTAAAAAATCTACTTCAAAGAAACCTCTGAATGACAATGCTTCGAAGTCCAAGCAATCGGAAGGGAAGGTTGCAAACAAAAAACAAACTGATAAGTCTTCAAAGGCTTTAGTTAAGGATGAAGGCAAAGGTAAAAGTAGTGACCAGGATAAAGCCGGACCTAGTAAGAAGGAAATGCATCGAGTGGTTGTTGATATTTTAAAGGAGGTAGATTTCAATAAAGCAACTTTATCTGATATCCTCAAACAACTTGGTACTCACTTTGACGTGGATTTAATGCATAGAAAAGCAGAGGTGAAAGATATAATTACAGATGTAATTAATAACATGTCTGATAACGATGGAGAGGAAACATCTAATGTTGGGGATGATGAAGATGATGCGTGA 1449 0.4058 MSSEILENEKPHGEEEAQAEENHTEQEDNSVKDDVKEKGEETKDRVEEEKNEEEKEIEERGEAKSNKSTKESGYATPVSERPTRERKTVDRYTVSSPDKFPKYSSFKPLSIEKGSGTQLKDIPNVAFKLSKRKADDNLRALHSILFGKIAKANMIKRNIGLFSGYVWAENEEKQRAKTRERIDKCVKEKLVDFCNVLNIPINKTSMKKEELSAKLFEFLESPHATTDVLLADKEKKGKKRARKQIPNKSSGEGSEAPAKKQKKPSQVGKKQKQSSDIEDSDMSEASDKKVDSEEDDVVGSKSESDHDDESMSEKEEEDKENAHKRSSKKTLKEDQATHVKKTTIVKGAKSNEKTFKKSTSKKPLNDNASKSKQSEGKVANKKQTDKSSKALVKDEGKGKSSDQDKAGPSKKEMHRVVVDILKEVDFNKATLSDILKQLGTHFDVDLMHRKAEVKDIITDVINNMSDNDGEETSNVGDDEDDA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01155 482 PANTHER DEK PROTEIN 14 474 IPR044198 GO:0003677|GO:0006325
Spst3g01155 482 MobiDBLite consensus disorder prediction 316 360 - -
Spst3g01155 482 Coils Coil 32 66 - -
Spst3g01155 482 FunFam DEK domain-containing chromatin associated protein 399 463 - -
Spst3g01155 482 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 407 462 IPR014876 -
Spst3g01155 482 MobiDBLite consensus disorder prediction 1 91 - -
Spst3g01155 482 SUPERFAMILY DEK C-terminal domain 405 462 - -
Spst3g01155 482 MobiDBLite consensus disorder prediction 375 413 - -
Spst3g01155 482 Gene3D - 399 463 - -
Spst3g01155 482 Coils Coil 168 188 - -
Spst3g01155 482 MobiDBLite consensus disorder prediction 272 308 - -
Spst3g01155 482 MobiDBLite consensus disorder prediction 230 413 - -
Spst3g01155 482 Pfam DEK C terminal domain 408 460 IPR014876 -
Spst3g01155 482 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01155 Spst-Chr3 14963822 14968551 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01155 K17046 - gmx:100785644 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01155 3 14963822 14968551 Spst3g01155 3 14963822 14968551 ECH