Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01153 ATGCCCGTACGCCGTCTCAGACTCGATTCCGACACCGACGAAGAAGAGCAAGACCCACTCCAACATCAACCCCACCCACAGACACAGCCACAGCCACATTTTCCGGAGGTTCCCGTAGAAATCTCCGACGACGACGACTTCATCGACGTCGCCGAAACCTTCTCTCCTCCCCTTCCCTCCTGTCCAGTCACCGACTTCCTCCACCGCCTCGGACTCTCCCTCAAGACAGACTGGGTCGCCTCCTGTCTCCGCGAACTCCAAGCCTCCGTTACGTCCTTCGAACACCTCGACGTCGCCGCGAAAGCCAAACGCTGTTTCGAGCAGTGCCTATTCGCCGACATGAATTCATGCGGCGCTGGCGTTCTCCCTCCCAATGTCGATTCCATGCACCTTCGCGTTCTCCCCGGTCCCTACGTTTTGCAGGTTGATGAAATAATTAATATCACTTGTCCTCTACGAGGAAGATATGAACAAGCACCTCCTGGACCTAAGAGGTGCCTCAAGTTATCAATGACTGATGGTGTTCAGAGAGTCTTTGGAATGGAGTATAGGCCTATCAAAGCTCTTGAAGTCTGTGCCTCTTCTGGTTTAAAGGTTGCTATCTCTAACGTACATGTGCGTCGTGGACTTCTGATGCTGGTCCCTGAAACCATTGAAATTTTGGGGGGATTGGTTGAGGAGCTGGATGCTGCTCGCAAACGGCTGGTTGAAGAAATAAACAAGCCACCTAGGGGAAAAAGAACCAAAAATGGAGAGCTTCCTCCTTTAGCAACTAGAGCAACTCTTGCTGCGTGGCCTTCAGATGGAGTTGATTTTCATGCGAGCAATGGCTCCACGTTGCACAGTAATGTTTCTTTCCAAGAAAACAACCAAGGTGCTGGCCCGAGAATACCTGACACTGTTAACAGCTTAACTACTGAAGATACTTTGCCTATGGGTGCACAAGATGCTGGTTCTAATTCAATAACCCACATGACATCAAATGTCGATGCCATGAATGTGGATATGGCTAGAGATACCAATCCTGTTTCACGTGCTAGTCCTATGGCTAACCAGCTCACTTCTGTTATCTCAAAGGCTGAAGAGATGCACTTAGATGCTGGTAATGTCACCAGGGAATATTCTGTTGACAGTCAGTCTTCTAACATGGTTTCAAATGTTGTAGCTGCACATAATGACACTATTCATACAACACGAGAAAGTTCTGTAGCTATCGATTACTCTCCTGTTGTAGAAAATGTTGAGACACATACGGATAGAACTCCCGAAGCCACAGATAGTACTCATCTGCAAAGAACCTCATCCACTGCTTTAAACACTAGCGATGTCAAGATGGTTGATGCCAGTGACCATTCACTTATACTGTCTGGAGACCAAGAGGTTCCTTTCACATACATAGCTAGTTTGTCAGCCAAGTGGGCTAAAATGAAGGAGGAAGCTCTTTCTGTTCAGGGTAAAATTAAGTGTTTTTTGACTGGTGTAAAAGGGTTCCAGTATAAGAAAAGGACAACGTATGAACTTCAGGCATATGTAGATGATGGTAGCCTTATTTCTGAAATCCTCGTTGATCATAATGTTGTGGAGAAAGGAATTGGTTATTCTCCGGAGGAGGTAACTTCGGCTCTTTCTTCATCCGACACGAAAATTGTCCACCAAATGAAGGATACAATGCGTAAATTTCAAGCCTTTTTAGCAAACTTTGAGGGAATAATTCTTGTGGAATTAAATAAAAAATCTTCCCTTCCACTTGCACTAGAAATGAGTCAAGGCTGTCCTCAATCTGATGCATGGTTACTTCTGAGAAGGCTGAAGTCTCTTCACCATCTACAAGTTCAAAACACTACGGATCCAATTGAATTATCCCCGCCTTACATTTTCATGATGAAAGTAGTACCATTCTACAGACAGAATCTTCACCATAATACTCGCCTTCCATTCCAAGACCCTGGCATAGCTAAGATGAACATAGAAATTTGGCGATATGGCTTTATCAGAGAGCATTTGTTGCTGAACCAACATGTATTCAGCTAG 2031 0.4545 MPVRRLRLDSDTDEEEQDPLQHQPHPQTQPQPHFPEVPVEISDDDDFIDVAETFSPPLPSCPVTDFLHRLGLSLKTDWVASCLRELQASVTSFEHLDVAAKAKRCFEQCLFADMNSCGAGVLPPNVDSMHLRVLPGPYVLQVDEIINITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGLKVAISNVHVRRGLLMLVPETIEILGGLVEELDAARKRLVEEINKPPRGKRTKNGELPPLATRATLAAWPSDGVDFHASNGSTLHSNVSFQENNQGAGPRIPDTVNSLTTEDTLPMGAQDAGSNSITHMTSNVDAMNVDMARDTNPVSRASPMANQLTSVISKAEEMHLDAGNVTREYSVDSQSSNMVSNVVAAHNDTIHTTRESSVAIDYSPVVENVETHTDRTPEATDSTHLQRTSSTALNTSDVKMVDASDHSLILSGDQEVPFTYIASLSAKWAKMKEEALSVQGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEILVDHNVVEKGIGYSPEEVTSALSSSDTKIVHQMKDTMRKFQAFLANFEGIILVELNKKSSLPLALEMSQGCPQSDAWLLLRRLKSLHHLQVQNTTDPIELSPPYIFMMKVVPFYRQNLHHNTRLPFQDPGIAKMNIEIWRYGFIREHLLLNQHVFS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01153 676 MobiDBLite consensus disorder prediction 1 21 - -
Spst3g01153 676 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 462 603 IPR032199 GO:0000166
Spst3g01153 676 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 60 605 - -
Spst3g01153 676 SMART DUF1767_2 64 157 IPR033472 -
Spst3g01153 676 Pfam RecQ mediated genome instability protein 70 234 IPR013894 -
Spst3g01153 676 Gene3D - 113 239 IPR042470 -
Spst3g01153 676 MobiDBLite consensus disorder prediction 1 39 - -
Spst3g01153 676 MobiDBLite consensus disorder prediction 416 435 - -
Spst3g01153 676 FunFam RecQ-mediated instability protein (DUF1767) 113 239 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01153 K10990 - qsa:O6P43_023544 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01153 3 14958455 14961987 Spst3g01153 3 14958455 14961987 ECH