Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01111 ATGACCACTCAACCCACCAACCATCCAAAGTCTGTTTACGACTTTACTGTCAAGGATGCTAAAGGCGATGATGTGGATCTTGCCACTTATAAGGGCAAAGTCTTGCTCATTGTTAATGTTGCTTCTAAATGTGGCATGACCAACTCAAATTATGTGGAGTTGAATCAACTATATAAGGAGTACAAAGACAAAGGGCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGGGAGGAAGAACCCGGCCGCAATGATCAAATTAAGGAGTTTGTCTGCACTCGCTTTAAATCTGAATTTCCCATCTTTAATAAGATTGAAGTGAACGGAGACGATTCTGCTCCTTTGTACAAATTCTTAAAGTCAGCTAAGTGGGGGATTTTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTGGTTGACAAGGACGGGCAAGTGACAGATCGCTATTATCCCACCACATCTCCTCTTAGCCTTGAGCGAGATATCCGTAAGTTAGTTGGTATTGTATGA 513 0.4172 MTTQPTNHPKSVYDFTVKDAKGDDVDLATYKGKVLLIVNVASKCGMTNSNYVELNQLYKEYKDKGLEILAFPCNQFGEEEPGRNDQIKEFVCTRFKSEFPIFNKIEVNGDDSAPLYKFLKSAKWGIFGDDIQWNFAKFLVDKDGQVTDRYYPTTSPLSLERDIRKLVGIV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01111 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Spst3g01111 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Spst3g01111 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Spst3g01111 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Spst3g01111 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Spst3g01111 170 PANTHER GLUTATHIONE PEROXIDASE 6 166 IPR000889 GO:0004602|GO:0006979
Spst3g01111 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Spst3g01111 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Spst3g01111 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Spst3g01111 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Spst3g01111 170 FunFam Glutathione peroxidase 3 169 - -
Spst3g01111 170 Gene3D Glutaredoxin 1 169 - -
Spst3g01111 170 PIRSF Glutathion_perox 1 168 IPR000889 GO:0004602|GO:0006979
Spst3g01111 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01111 Spst-Chr3 14516900 14518583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01111 K00432 - gmx:100808523 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01111 3 14516900 14518583 Spst3g01111 3 14516900 14518583 ECH
Spst2g00311 2 2395219 2396338 Spst3g01111 3 14516900 14518583 PCT