Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01105 ATGGCCGTCGTTTCGCGAGCGCCCACCACCTACACGCGCCACCACTTAACGCGACGCGACTTCGATACAAAAACCAAACTCTCTGCTCCCAACACGTTGTCATGCTCTTCCTGGGATTCTGCTAAGAAGCCTCCTCCGACGCCGAGGATTGCCACACGTGGCAGTAGAGTGATTGTTGCTGCGAGCCCTCCCACTGAAGACGGTGTAGTTGCCGCTGACCCACTCACCAAGCAGGATCTCGTCGATTATCTCGCCTCGGGTTGCAAGTCCAGGGAAAAATGGAGGTTTTTGCGGTCCAGCGACTGCATTGCCTCTGCCAACAACCACATTGTCTGCAATATCAAGGATCACGACAAAACTGCAACCACAACCACGATCACAAGTACTGAACATGAGAAGTTTGGTTTTGAGTTTGGAAGCTTGCGTCCTACGAAATATGAGCAAATAGCAGAATTGCTGAATGGCATTGCCGAGAGATTTGATTGGGATAAAATAATGGAAGATGATAAAATTATTGGACTCAAACAGGGGAAGCAGAGCATATCATTGGAGCCTGGTGGTCAGTTTGAACTTAGTGGAGCCCCACTTGAAACCTTGCATCAGACTTGTGCTGAAGTTAATTCACACCTTTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGAATTGGTTTCCAGCCGAAGTGGGGAATCAAAGACATACCTGTAATGCCAAAGGGAAGATATGAAATTATGAGGAATTATATGCCTAAAGTTGGCTCTTTGGGGCTTGACATGATGTTCAGGACATGCACTGTACAGGTCAATCTGGACTTTAGTTCTGAGGTGGACATGATCAGGAAATTCCGTGCTGGCCTTGCTTTGCAGCCTATAGCAACTGCTCTCTTTGCAAATTCACCTTTTAAAGAAGGAAAGCCCAATGGTTTTGTCAGTATGAGAAGCCATATTTGGACCGATACTGATAAGGACCGCACAGGCATGCTGCCTTTTGTTTTTGATGATTCTTTTGGGTTTGAACAGTATGTCGATTATGCTCTTGATGTTCCTATGTATTTTGTCTATCGGAAACATAGATATATCGATTGTACTGGAAAGACCTTCAGGGACTTCTTGGCTGGAAGACTTCCTTGTATTCCTGGTGAATTACCAACTCTCAATGATTGGGAAAATCATTTGACAACTATATTTCCTGAGGTCAGGCTGAAGAGGTATTTGGAGATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGGTTATGTGCATTACCAGCACTTTGGGTAGGGTTATTGTACGATGAAGTTTCTCTACAAAGTGTTTTGGATTTGACGGCTGATTGGACCCCAGAAGAAAGACAGATGTTAAGGAATAAGGTTCCCGTAACTGGTCTGAAGACTCCATTCCGAGACGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTACAGTTGGCAAAGGATGGCTTGGAGAGAAGAGGCTTCAAGGAATCGGGATTTTTGAATGAGGTTGCCGAGGTGGTTAGAACAGGCGTCACTCCAGCTGAGAGGCTTTTGGAATTGTATCATGGAAAGTGGGAGCAATCCATGGGATATCAAGTGGTAGGAAGAACTGATAATTCAGATATTTGGCTTAGCTAG 1641 0.454 MAVVSRAPTTYTRHHLTRRDFDTKTKLSAPNTLSCSSWDSAKKPPPTPRIATRGSRVIVAASPPTEDGVVAADPLTKQDLVDYLASGCKSREKWRFLRSSDCIASANNHIVCNIKDHDKTATTTTITSTEHEKFGFEFGSLRPTKYEQIAELLNGIAERFDWDKIMEDDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGIKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEVDMIRKFRAGLALQPIATALFANSPFKEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKHRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPALWVGLLYDEVSLQSVLDLTADWTPEERQMLRNKVPVTGLKTPFRDGLLKHVAEDVLQLAKDGLERRGFKESGFLNEVAEVVRTGVTPAERLLELYHGKWEQSMGYQVVGRTDNSDIWLS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01105 546 Pfam Glutamate-cysteine ligase family 2(GCS2) 157 448 IPR006336 GO:0004357|GO:0042398
Spst3g01105 546 SUPERFAMILY Glutamine synthetase/guanido kinase 130 530 IPR014746 GO:0003824
Spst3g01105 546 NCBIfam glutamate--cysteine ligase 127 530 IPR011556 GO:0004357|GO:0006750
Spst3g01105 546 Gene3D - 102 535 - -
Spst3g01105 546 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 128 530 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01105 Spst-Chr3 14470775 14480751 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01105 K01919 - gmx:547545 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01105 3 14470775 14480751 Spst3g01105 3 14470775 14480751 ECH
Spst2g00305 2 2341832 2342752 Spst3g01105 3 14470775 14480751 PCT