Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01103 ATGATTGAATCAATTGCTGCAACTTCACTCCTTGTCCACCGTCCAATTTGCAGTGGAAATCTGGTCAAGGATGTAGTTTTTAAGCGCAAATATTTGAATTCTTGTCGGTTGCCGGCAACCGAGTTTTTTGGTGGTGGAAGGATTGTGTTTTCTCTAACTTTGCCTGTCAAATCTGATAAGGATAGATTTATGTTTTCATCGATTAAGGCTTTGGCTGTAGAGTTAACAAGAGAAGCACATGCTTATAAAGAAGAATTGCCCAACAGTGATAATAGAGATAATAACAGGATTGGTAGTGGATTTGGTCAAAGGTCTGAGTCGTGGCCTCCGGCTAATAGAGCCGATAACCCCTCTCTCCGGAATCCCTTACTCCGGCATGAGAGGATGGGATGTGGTTGGTTGGGTGTTATATTTGAATGGGAGGGCGTTCTCGTTGAGGACAATCCTGATTTAGAAAAGCAAGCCTGGCTGGCACTCTCTCAGGAAGAAGGCAAACCCTCTCCTCCTGCTTTTATGCTCAAGAGAATAGGAGGCATGAAGAATGAACAGGCAATTTCAGAAGTTCTTTGTTGGTCGAGGGATCCGGCACAGATAAGAAGAATGGCTAATAGAAAGGAAGAAATCTATCAAGCTTTACACGGTGGGATATATAGGTTTTTGTCAGGTTCTAAGGAGTTTGTCAGTGTTTTGATGCATTATAAGATACCAATGGCTTTGGTTTCCACACGTCCCAGGAAAGCTCTTGAGTCTGCAATAGGGGAGATTGGGATTGAGGACAATTTCAGTGTCATTGTAGCAGCAGAGGATGTTCACAGGGGAAAGCCTGATCCTGAAATGTTTATTTATGCTGCCCAACTTTTGAACTTCATACCTGAGAGGTGCATTGTGTTTGGAAACTCAAATCTAACAGTGGAGGCTGCACATGAAGGACGGATGAAGTGTGTGGCTGTTGCTAGCAAGCATCCTGTCTTTGAGCTTGGGGCTGCAGACTTGGTTGTCAGGCGCCTAGATGAGCTTTCAGTGGTTGATTTGAAGAATCTTGCAGACATTGAAATGACTGAATTTGGGTCTCCAGAGCCTGAGGTGGAGCTGGAGATGGAAAAAGATTATGACCCATCATCAGTTGATGATAATTTCTGGTAA 1143 0.4374 MIESIAATSLLVHRPICSGNLVKDVVFKRKYLNSCRLPATEFFGGGRIVFSLTLPVKSDKDRFMFSSIKALAVELTREAHAYKEELPNSDNRDNNRIGSGFGQRSESWPPANRADNPSLRNPLLRHERMGCGWLGVIFEWEGVLVEDNPDLEKQAWLALSQEEGKPSPPAFMLKRIGGMKNEQAISEVLCWSRDPAQIRRMANRKEEIYQALHGGIYRFLSGSKEFVSVLMHYKIPMALVSTRPRKALESAIGEIGIEDNFSVIVAAEDVHRGKPDPEMFIYAAQLLNFIPERCIVFGNSNLTVEAAHEGRMKCVAVASKHPVFELGAADLVVRRLDELSVVDLKNLADIEMTEFGSPEPEVELEMEKDYDPSSVDDNFW 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01103 380 Gene3D Putative phosphatase; domain 2 146 219 IPR023198 -
Spst3g01103 380 NCBIfam HAD-IA family hydrolase 252 317 IPR006439 -
Spst3g01103 380 MobiDBLite consensus disorder prediction 358 380 - -
Spst3g01103 380 MobiDBLite consensus disorder prediction 84 118 - -
Spst3g01103 380 Pfam Haloacid dehalogenase-like hydrolase 136 317 IPR041492 -
Spst3g01103 380 MobiDBLite consensus disorder prediction 92 114 - -
Spst3g01103 380 CDD HAD_BPGM-like 196 319 - -
Spst3g01103 380 Gene3D - 136 334 IPR023214 -
Spst3g01103 380 SUPERFAMILY HAD-like 136 339 IPR036412 -
Spst3g01103 380 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01103 Spst-Chr3 14446558 14447700 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01103 K22912 - gmx:100798181 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01103 3 14446558 14447700 Spst3g01103 3 14446558 14447700 ECH