Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01100 ATGCTTCCTGCTCCTTCTGATGCCTTGTGTGCTAGTTTGTGGTCTTTGGATTCATCAATGGGACAAGAGTTGGAGCTGGATCTTGATGACAAGTCTTCAGTAGGTCTGAGTCCTAATACTGTTCTTCCATCTCATCAATACCGTGTGAATGTGAAGAAAATATCCAAGAAAGGAAAACCCACTGGGAAAGATGAATTTTTTACTCTCAGGGAGGGCTTTGCTGAGATTAAATTTGCTCGCTTCCGCAGTTCTTCGTGTAAGAACCATCTTTCTAAACTTCATGGATTGGAAGGTAATATAGAAACCAGGCGCTGTTCCATGTATCAGAGTTCAGAGGAAGTGAAAAACATAAAGAAAATGGGCACCATGGTAGAGGGAAGGAAAAAGATAGAAATTTCAAGGAGAAGTGACACTTCCTTCACAGGTAGCATTGTTGATTCTTTGTGTGGTTCAGATGATGAAGGTTCTGGGGTTAGATCTCCAAATAGATTTATTGAAATTTGTGTAAATTCAGATGTTAGAAAAAAGAACTCTACCACAGTACGAGGGAGAGATTCTATAAATTTGAAGCCCAGAAGTGATAAAGTTGCTGATTCTATAATGAATGGCAATTGTTGTGTTGAAAAGGACACGGTCCACTCGTTTCAAAAGTCATTCTCGGCTAAGGCGGCAGTCTCTTACTTGCCATCTCCATTAGGAAGTGATTGCTCATCAAGCGCAAGTCCAGAAGTACAATTCATCCATAGCAGAAAAAGGTTGAATCATTTCACAAAGTCAAAATCACAGAGAAGTCCAGTGAGTCAGATACGGGGCAGTAATGAGATCAAATCAAATGAGAAAGCAAACATTGCAAGAAATAGGACTTATCAGAAATCATTGCTAAATGACTTGTCCAAAACAGGAAAGCATTCTGATATTATTTCTGAGTTTATCAACAGAGAGATCCAGTATTCAGGTATAGCTTCTTCACCAGTTCACCTGCACGGCAATCTCAAGTTGGAAAATAGAAATGGAGTGCCGTTGTTTGAGTTCAAGGTGAAGTGCCCTGAAGATGTGTTTGTGGCCAAGACATGGAGAACAGGTAATGCTTTCAACTGGGTATATACCTTTCATTCCATTGATAATAGAAAGAAAAGCAATGCCACTGGATTGGGATGCCATGATTTTGATAAAGATTCCTCAACAGTTGCACAGATGCTAGTTTCATGTAATTTATGTTCTGAAGTAGAAGGCAGAGTATTTGACAACTCTATGGTGACAGAGTTTGTGTTGTATGATTTCACACACTCAAGACAAAGTGTTTCGCGTGAGAAAAAGTCTTTCAGTGAACCAGATGCTTCTAAAACTCTGAAAGCTTCCCATGTTGGATGGAAGGAAAAAGCTATGGGGTTGGATGAGAACCATGCAGTAAAAAACAAACTTCAAGACAAATCTCTATCAAGCAATGTTGAATTTGATGATTTAAATTATTTTCCTTGCTCGTCCAGAGAATACCATTCAAACCTTGAAATTGCTGCTATTGTTTTGCAAATTCCGTTTTCCAAGAGAGAAAGCTTGAAGTACAAAAGAGCAGACATAATAAGTGGTAAAGAATATTCCAACATAAGTGATCTATCTGCCGAAATAGATAGAAAGAGTCTTGGTCACAACAAAATCCAGGAACAGTTGAAGGTGGTAATACCAACTGGCAATCATGGTTTGCCAAATGCTGAAAGCCAGGGACCCTCATCGTTACTTGATCGACTACGACATGGTGGAGGCTGTGACTGTGGTGGCTGGGACATGGCCTGTCCCCTTATTCTTTTGGGCAATCCTGGTATCAAATTTGCTGAGGACTGCCCACTTAAGGAGGAACATCAACCGTTAGAACTTTTTGTTCAGGGATCAAAAGGAAGCAGTCCTACCTTCAGCATGACAAGAATTGAAGAGGGGCATTATGCTGTTGATTTTCATGCACAATTATCTGCTTTACAAGCATTCTCAATTTGTGTTGCCATTTTGCATGGAACTTCAGCCTTCAGCGGTGGAGGACATGAGAAAAACCAGGAGTTATCTCAATGCAATTCTCTGAAAATGCTTCTTGAGGAGGATATAGATTTTTTTTTCAAATCAGTCACAACTGAGAAAAAGACTGGTTGCAAGAATCCAAAAGGAGTTCGTCGATCCTATGTGCCGAACCCGCCCTTTTCTCCTATTGCACGCGTATAA 2208 0.4013 MLPAPSDALCASLWSLDSSMGQELELDLDDKSSVGLSPNTVLPSHQYRVNVKKISKKGKPTGKDEFFTLREGFAEIKFARFRSSSCKNHLSKLHGLEGNIETRRCSMYQSSEEVKNIKKMGTMVEGRKKIEISRRSDTSFTGSIVDSLCGSDDEGSGVRSPNRFIEICVNSDVRKKNSTTVRGRDSINLKPRSDKVADSIMNGNCCVEKDTVHSFQKSFSAKAAVSYLPSPLGSDCSSSASPEVQFIHSRKRLNHFTKSKSQRSPVSQIRGSNEIKSNEKANIARNRTYQKSLLNDLSKTGKHSDIISEFINREIQYSGIASSPVHLHGNLKLENRNGVPLFEFKVKCPEDVFVAKTWRTGNAFNWVYTFHSIDNRKKSNATGLGCHDFDKDSSTVAQMLVSCNLCSEVEGRVFDNSMVTEFVLYDFTHSRQSVSREKKSFSEPDASKTLKASHVGWKEKAMGLDENHAVKNKLQDKSLSSNVEFDDLNYFPCSSREYHSNLEIAAIVLQIPFSKRESLKYKRADIISGKEYSNISDLSAEIDRKSLGHNKIQEQLKVVIPTGNHGLPNAESQGPSSLLDRLRHGGGCDCGGWDMACPLILLGNPGIKFAEDCPLKEEHQPLELFVQGSKGSSPTFSMTRIEEGHYAVDFHAQLSALQAFSICVAILHGTSAFSGGGHEKNQELSQCNSLKMLLEEDIDFFFKSVTTEKKTGCKNPKGVRRSYVPNPPFSPIARV 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01100 735 PANTHER EXPRESSED PROTEIN 25 157 - -
Spst3g01100 735 Pfam Domain of unknown function (DUF3527) 324 669 IPR021916 -
Spst3g01100 735 SUPERFAMILY Tubby C-terminal domain-like 635 670 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01100 Spst-Chr3 14431097 14434997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01100 - - gmx:100811734 1186.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01100 3 14431097 14434997 Spst3g01100 3 14431097 14434997 ECH
Spst2g00301 2 2302483 2312724 Spst3g01100 3 14431097 14434997 PCT