Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01087 ATGCCACCTTTTGCAGGTTCTCAACCAGTTGGGTTGTCCAAGCCAGATTCCAACATAGTTTCCATCGACGTGGGAGGGCAAGTGTTCCAAACCACGAAACAGACACTAACCTCGGCGGGACCGAAATCTTTCTTCTCGAGAATAGCGGAATCTTCTGGAATCTACACGCCGTTCATAGACAGAGACCCAGAACTGTTCTCGCTCCTCCTCTCTCTCCTCCGCACCGGAAACCTTCCCTCAAAGGCCAAAGCTTTCGATCTCCACGACCTGATTATCGAGTCAAAATTCTACGGCATCGAGACCCTCCTCATCAATTCCCTCTCCAGCCCTTCCCAATTGGAACCCTTCAACCTCCAAAAATCCCTCCTTTTGCCCCTCAACGGCCGTGACTCTCCCTCCGCCCTCGCCGCCACAACCTGCGGTGCCCTCCACGTCGCGCACGGCAGCAAGATCACCTCCTTCGACTGGTCCCTCCGCCGCAAGGCCACCGTCCTCACCTACTTCACCGCCGTCGACTCCCTTCTCGCACTCTCGCCGGCGCTCGTGGCCGCCGGCGCCAACGACTTCTCCGGCCTCCAGATCCTGGACCTTGGTAGCGGCCGCGTCAGGGAAACCCTAAACTGGGAAAACGTCACCAAATCCGGGTCCACCGTCCAAGCCATCGGAGCCTCCCCTGAAAACATGTTCGTCAGCTTCGAATCGTCGCGCCGAAACTCCAATTCCATTATGGTTTACGATTTGCACACCCTAGCCCCCGTCACCGAGATCGGTCACAACGAAATCTTCGGTGCAGACATCGATTCAGCAATTCCGGCGACGAAGTTGCAATGGATTGAGAGTTGCAATTTGTTGATGGCCTCTGGGTCCCACAGTGGGCCCTCCGGCGTTTCCGGCAACATTCGTTTGTGGGATGTTCGTTCCGGCAGCGTCGTCTGGGAGATTTCGGAGAAGGTGGATTGTTTCGCTGACGTGGCGGTTTGTGATGGGTTGTCGGCTATTTTTAAGGTTGGGGTGAATTCGGGTGAAGCCTCGTACGTTGACTTGAGGAATTTGAACGAGGAGAGCGCGTGGGTTTGTCTTGGGGATAAAAGAAAGGCAATGAACAATAATGGGAAAAAGGAAGGGTTTGGGTGCAAGATCGAAACGCAGGGGAATCAAGTGTTTTGCACGAAGGGTGGTGACGTGGAATTGTGGTCTGAGGTTCTCATGGGTTCTGGGAACAGTGGGAGGATCTTCAAGAAGAACTTGATGGGTAGAATGAGGGACATGGGTGGGGCAAAGATTACCAATTTGGCCTTTGGAGGAAGCACCATGTTCTTGACCAGGAAGGATCAGCAATGTGTTGAGGTCTGGCAGAGTTCTTCAAAGGAATTTTGA 1377 0.5389 MPPFAGSQPVGLSKPDSNIVSIDVGGQVFQTTKQTLTSAGPKSFFSRIAESSGIYTPFIDRDPELFSLLLSLLRTGNLPSKAKAFDLHDLIIESKFYGIETLLINSLSSPSQLEPFNLQKSLLLPLNGRDSPSALAATTCGALHVAHGSKITSFDWSLRRKATVLTYFTAVDSLLALSPALVAAGANDFSGLQILDLGSGRVRETLNWENVTKSGSTVQAIGASPENMFVSFESSRRNSNSIMVYDLHTLAPVTEIGHNEIFGADIDSAIPATKLQWIESCNLLMASGSHSGPSGVSGNIRLWDVRSGSVVWEISEKVDCFADVAVCDGLSAIFKVGVNSGEASYVDLRNLNEESAWVCLGDKRKAMNNNGKKEGFGCKIETQGNQVFCTKGGDVELWSEVLMGSGNSGRIFKKNLMGRMRDMGGAKITNLAFGGSTMFLTRKDQQCVEVWQSSSKEF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01087 458 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 13 456 IPR045068 -
Spst3g01087 458 Gene3D Potassium Channel Kv1.1; Chain A 12 109 IPR011333 -
Spst3g01087 458 Pfam BTB/POZ domain 20 106 IPR003131 GO:0051260
Spst3g01087 458 SMART BTB_4 18 114 IPR000210 GO:0005515
Spst3g01087 458 SUPERFAMILY DPP6 N-terminal domain-like 181 451 - -
Spst3g01087 458 Gene3D - 134 458 IPR015943 GO:0005515
Spst3g01087 458 SUPERFAMILY POZ domain 17 104 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01087 Spst-Chr3 14295013 14296389 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01087 - - gmx:100792189 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01087 3 14295013 14296389 Spst3g01087 3 14295013 14296389 ECH