Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01086 ATGAGAGGAACTAATGGGACTGATGGTAACAACACTTTCGACACTATAAACGCTGCTGCGTTTGCCATAGCCTCTGCTTCCCACAACCGCGTTTCCCAACCTCCTACCCAGAAGAAAGGATGGGGAAGCTGGTTGAGCAAAATTGGGTGTTTTGGATATCAAAGGAACAGAAAGCGCATTGGACATGCAGTCCTTGTTCCAGAAACAGCCCCCAATGGAGCAGATCATGCTGCAGCTGTTAGTTCAACACAAGCACCAACCATAACACTCCCCTTCGCCGCTCCTCCATCATCTCCTGCATCTTTCTTTCAATCAGAACCTCCCTCGACTGCACACTCGCCAGTTTGTAAAATTTCTCAGACTTGTGTGTCTGCGAGCATGTACTCCCCTGGTGGTCCTGCCTCAATCTTTGCCATTGGCCCTTTTGCTCATGAAACACAATTAGTATCACCACCTGTTTTCTCAGCTTCATCCACTGCTCCTTTCACTCCACCTCCTGAATCTGTCCACTTGACCACGCCTTCTTCACCGGAGGTCCCTTTTGCTCAGCTTCTTGACCCTGAGAATAGGAATGGTGAGACCTTTCAGAGGTTCCAAATATCTCACTATGACTTCCAATCCTATCAGTTTCACCCCGGAAGTCCAGTTGGTCAACTCATATCTCCAAGATCCGCCATCTCGGCTTCCGGCACCTCATCGCCACTCCCTGATTCCGAATTTAATGCCACTCTCTCCCATATCCTTGATTTCCAGAGAGCAGACCCTCCCAAGCTTCTCAACTTAGATAAACTGTCTGCTTATCAAAACAGGAAGTCAAACCAAGGTTCCGGCTCTTTGACCCCGGATGCTGCATGGTCTACAACACAAGCTGGTTTTCTTTCAAATCATTGGGTTTCTGAGATTAAAGTGTCCCCACGTCCGAGCAATAATCGAGTCAATGAGATTAGTATAAATCATAGAGTTTCATTTGAAATATCTGCCCAGAAAGTGTTGGAATCTCTAGAAAACAAGCCGGCAGCATCAGCATGGACTAAGGTCATGGCAAAATTGAAAAATGATGCACCAACAGCGGCCGACAAAGAAGAAAATTTAGGACAAACCGGGTGCAGTGAGAAGCAAGTCCTGGCTGAAACTCACAGTGATCAACCACTGGAAACCAATTTGAGTGGAGATGATGCAACAGTTCATGAGAAGGATCAGTCCTTAACACTTTCTTCTGCTAAAGAATTCAATTTCGATAATGCAGAAGGAGGAGATTCCCTTGCTCCCAATATAGTTGCTGACTGGTGGGCTAATGAGAAAGTTGCAGGGAAGGAGAGAGGGGCATCCGAGGATTGGTCCTTTTTCCCAATGATTCAACCTGGTGTCAGCTAA 1374 0.4672 MRGTNGTDGNNTFDTINAAAFAIASASHNRVSQPPTQKKGWGSWLSKIGCFGYQRNRKRIGHAVLVPETAPNGADHAAAVSSTQAPTITLPFAAPPSSPASFFQSEPPSTAHSPVCKISQTCVSASMYSPGGPASIFAIGPFAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPENRNGETFQRFQISHYDFQSYQFHPGSPVGQLISPRSAISASGTSSPLPDSEFNATLSHILDFQRADPPKLLNLDKLSAYQNRKSNQGSGSLTPDAAWSTTQAGFLSNHWVSEIKVSPRPSNNRVNEISINHRVSFEISAQKVLESLENKPAASAWTKVMAKLKNDAPTAADKEENLGQTGCSEKQVLAETHSDQPLETNLSGDDATVHEKDQSLTLSSAKEFNFDNAEGGDSLAPNIVADWWANEKVAGKERGASEDWSFFPMIQPGVS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01086 457 MobiDBLite consensus disorder prediction 156 178 - -
Spst3g01086 457 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 5 457 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01086 Spst-Chr3 14290430 14292504 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01086 - - vra:106768529 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01086 3 14290430 14292504 Spst3g01086 3 14290430 14292504 ECH
Spst2g00300 2 2297606 2299841 Spst3g01086 3 14290430 14292504 PCT