Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01085 ATGGCACGGTTGGTTCTGCCATCGAAGAGATTGACCCTTTCGAGGAACACTCTACTGGGTTTGATCTCCCCAGCTCCTCTTCAGCTTAATTGCAGTATTCGTTATTTTCAGAATACAGCAAAACGGAGCATCCGATACAAGCATTTAGTTGCATCAGAGGTTAATTTCCAAAAGAAGTATTACCCACTATATTCTTCACTACCAAGGGTCAAGAAACTAAGTAGGAGGCTAATTTGTGCAGTTGCCACAGAGGATTTACAGAAGCAAGTTGAAGAATCTAAAATGGAGACACCAAGGGAAATATTCTTAAAGGATTACCAGATGCCTGATTACTACTTCGACACTGTGAATCTGAAATTTTCCTTGGGAGAGGAGAAGACAATAGTTAATTCTAAAATTGCAGTGTATCCTCGCATTGAAGGTTCTTCTCCTCCTCTAGTTTTAGATGGACAAGATGTATCTTTGGTTTCAGTTCAGCTGAATGGCAAGGCTTTGAAGGAGGAAGATTATCATTTGGATTCACGCCATCTCACAATCCGATCACCTCCTTCTGGTAAATATGATCTCGAAATTGTCACAGAGATTTGTCCACAGAAAAACACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATTACATTTTATCAGGATCGGCCTGATATAATGGCAAAATATACAGTTTGCATTGAGGCTGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTGGCTGAGCAAGGTGACTTGGAGGATGGGAGGCATTATGCTGTTTGGGAGGACCCCTTCAAGAAACCTTGTTACCTGTTTGCCTTGGTTGCCGGGCAATTGCAGAGCAGAGATGACACATTTATTACCCGTTCAGGGAGGAAAGTGTCCCTTAGGATATGGACACCTGCAGGAGATGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGACGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAGAACAAGAGCTTGAATATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAAACTGCCACTGATGCAGATTATGCTGCTATATTGGGGGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGTCGGGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTTTCATCTGACATGGGAAGTCGAACTGTAAAGCGGATTGCTGATGTTTCTAAACTTAGAAATTATCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCAGTGCGACCACATTCTTATATCAAGGTCTATGAAAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTATTAGGAAGTCAAGGCTTCCGTAAAGGCATGGATCTTTATTTCAAAAGACATGACGGTCAAGCTGTGACGTGTGAAGATTTTTTTGCTGCCATGCGAGATGCAAATGATGCTGATTTTGCAAATTTCTTGCAATGGTATTCTCAAGCTGGGACCCCTGTTGTCAAAGTAAACACTTCTTATAATTCAGAAGCACATACTTTTTCTTTGAAGATTAGTCAAGAGATACCACCAACTCCAGGACAATCAGTTAAGGAACCCACGTTCATTCCTGTTGCAGTGGGCTTGCTTGATTCCACCGGCAAGGACATTCCTCTTTCAAGCCTATATCATAATGGGACTCTGCAATCTGTTTCAAGCAATGATCAATGTGTCTGCACTACAGTCCTTAGAGTGACCAAGAAAGAGGAAGAGTTTGTATTCACTGATATATTTGAGAGGCCTGTTCCTTCTTTGTTAAGGGGGTACAGTGCTCCTGTTCGCCTGGAATCTGATCTCACGGAGAGCGACTTGTTTTTCCTACTAGCCAATGATTCTGATGAATTCAACCGTTGGGAGGCTGGACAAGTTTTGGCACGGAAGTTGATGCTTAATTTGGTGGATGATTTTCAACAAAACAAACCATTGGTTTTGAATCCCAATTTTGTTGCTGGGTTCAAACGTATTTTATGTGACTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCCGGGGAGGGAGAAATAATGGACATGATGGGGGTTGCAGATCCTGATGCTGTTCATGCAGTACGGACTTTCATCAGGAAGCAGCTTGCAAGTGAACTGAGATCAGAGTTCCTCACCAAAGTCGAAAATAATAGGAGCGCTGAACAATATGTCTTCAATCACCCAAACTTGGCCAGGCGTGCTCTGAAGAATATTTCTCTTGCTTATCTTGGATGCCTTGAGGAACAAGAATTCACCAATCTTGCACTGCATGAATACAATACTGCTACAAATATGACTGAACAATTTGCTGCTTTGGCTGCCATAGCTCAGAACCCGGGTAAAACCCGTGATGATGTTCTAGCTGATTTTTATGGAAAGTGGCAGCATGATTTCTTGGTGGTGAACAAATGGTTTGCTCTGCAAGCAATGTCTGACATTCCTGGTAATGTTGAGAATGTTCGGAAACTGTTAAACCATCCAGCATTTGACTTGCGCAATCCAAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCGCCGGTGAACTTTCATGCAAAGGATGGATCAGGCTACAAGTTTTTGGGAGAAATTGTGCTGCAACTTGACAAGCTAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAAGCGTTACGACGAAGGCAGACAAAAACTTGCAAAGGCTGAGTTGGAGAGGATCATGTCAAGTAATGGACTATCGGAGAATGTGTTTGAGATAGCCTCGAAAAGCTTAGCTGCTTAA 2922 0.4268 MARLVLPSKRLTLSRNTLLGLISPAPLQLNCSIRYFQNTAKRSIRYKHLVASEVNFQKKYYPLYSSLPRVKKLSRRLICAVATEDLQKQVEESKMETPREIFLKDYQMPDYYFDTVNLKFSLGEEKTIVNSKIAVYPRIEGSSPPLVLDGQDVSLVSVQLNGKALKEEDYHLDSRHLTIRSPPSGKYDLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVCIEADKSLYPVLLSNGNLAEQGDLEDGRHYAVWEDPFKKPCYLFALVAGQLQSRDDTFITRSGRKVSLRIWTPAGDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLQWYSQAGTPVVKVNTSYNSEAHTFSLKISQEIPPTPGQSVKEPTFIPVAVGLLDSTGKDIPLSSLYHNGTLQSVSSNDQCVCTTVLRVTKKEEEFVFTDIFERPVPSLLRGYSAPVRLESDLTESDLFFLLANDSDEFNRWEAGQVLARKLMLNLVDDFQQNKPLVLNPNFVAGFKRILCDSSLDKEFVAKAITLPGEGEIMDMMGVADPDAVHAVRTFIRKQLASELRSEFLTKVENNRSAEQYVFNHPNLARRALKNISLAYLGCLEEQEFTNLALHEYNTATNMTEQFAALAAIAQNPGKTRDDVLADFYGKWQHDFLVVNKWFALQAMSDIPGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKLNPQVASRMVSAFSRWKRYDEGRQKLAKAELERIMSSNGLSENVFEIASKSLAA 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01085 973 Coils Coil 970 973 - -
Spst3g01085 973 FunFam Aminopeptidase N 377 532 - -
Spst3g01085 973 Pfam Peptidase family M1 domain 325 527 IPR014782 GO:0008237|GO:0008270
Spst3g01085 973 Gene3D - 292 376 - -
Spst3g01085 973 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Spst3g01085 973 Gene3D - 533 646 IPR038438 -
Spst3g01085 973 Pfam Peptidase M1 N-terminal domain 117 283 IPR045357 -
Spst3g01085 973 Pfam Domain of unknown function (DUF3458) Ig-like fold 533 646 IPR035414 -
Spst3g01085 973 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Spst3g01085 973 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Spst3g01085 973 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Spst3g01085 973 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Spst3g01085 973 Gene3D - 648 972 IPR037144 -
Spst3g01085 973 FunFam Puromycin-sensitive aminopeptidase 648 972 - -
Spst3g01085 973 CDD M1_APN 105 530 - -
Spst3g01085 973 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 973 IPR012779 GO:0008270
Spst3g01085 973 FunFam Aminopeptidase N 108 291 - -
Spst3g01085 973 FunFam Putative aminopeptidase N 293 376 - -
Spst3g01085 973 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 540 - -
Spst3g01085 973 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Spst3g01085 973 Pfam Domain of unknown function (DUF3458_C) ARM repeats 651 972 IPR024601 -
Spst3g01085 973 Gene3D Neutral Protease Domain 2 377 532 IPR027268 -
Spst3g01085 973 FunFam Aminopeptidase N 533 647 - -
Spst3g01085 973 NCBIfam aminopeptidase N 105 971 IPR012779 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01085 Spst-Chr3 14276322 14284705 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01085 K01256 - gmx:100775476 1820.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01085 3 14276322 14284705 Spst3g01085 3 14276322 14284705 ECH