Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01067 ATGCCTTCTCCTTCAGGTACTCAACCTCTAGCGCAAGAGTATTTGATTGCATTGCACTGTCATTTTCTAACCGTTTTCTGTTTCACAGCACGCAGACTCATAATGGCCGCGATATCCAACTCATTCTCACTCAAACACGGTTTCTATCTCGCGCGTCCGCAAAATCCCTTTCGCACTCCAGTTCTTCCTTCTTCCACTTCCATTAAATTCAGAAGATGCTACGCCGCGTTCGCCAATGAGAATCGCGAATACGTTATCGTTGGCGGTGGAAATTCCGCGGGATATGCTGCACGCACTTTCGTGGAGCACGGCATGGCGGATGGACGGCTCTGTATTGTGACCAAAGAGCCATATGCACCTTACGAGCGTCCCGCTCTGACGAAAGCGTATTTGTTCCCGCCGGATAAGAAACCAGCGCGTCTTCCTGGTTTTCACACCTGTGTTGGATCCGGTGGAGAGAGGCAGCCTCCAGAGTGGTACAAAGAGAATGGGATAGAGATGTTGTATGAAGATCCGGTAAAAGATATTGATATTGAGAAGCAAACTTTGACAACAAATTCTGGAAAACTTTTGAAGTATGGTTCACTTATTATTGCAACAGGATGTACGGCATCAAGGTTTCCAGAGAAAATTGGGGGAAACCTACCTGGTGTCCATTATATCCGGAATGTTACAGATGCTGATGCACTGATTTTATCATTGGAACGAGCAAAAAAGGTTGTAGTTGTTGGAGGTGGTTATATTGGACTGGAGGTTGCTGCTGCTGCTGTTGGTTGGAATCTTGACACGACGATCATATTTCCGGAGGATCAACTTTTGCAAAGACTGTTTACTCCTTCTCTTTCCCGGAGATATGAAGAACTTTATCAAAAAAATGGAGTCAAAATCTTGAAGGGTGCTTCCATAAAAAAATTGGACGCTGGTTCTAACGGACATGTAGCTAGTGTGAAACTTGGAGATGGATCGATTGTGGAAGCAGATACGGTTATTATAGGCATCGGAGCAAAACCTGCTGTGAGCCCCTTTGAGAGGGTGGGCCTAAATACAGATGTTGGAGGTATACAGGTTGATGGTTTGTTCCGGACTAGCATTCCTGGAATATTTGCTGTTGGTGATGTAGCAGCTTTCCCTTTAAAGATCTATAACCGTATCTCTCGAGTGGAACACGTAGATCATGCCCGTCGCTCTGCACAGCACTGTGTGAAAGCATTACTGACCGCACAAACTCACACGTACGACTATCTTCCATATTTCTACTCGAGGGTTTTTGAATATGAAGGAAGCCCTAGAAAAGTATGGTGGCAGTTCTTTGGGGACAATGTTGGAGAAACAGTTCAAATTGGAAATTTTGATCCTAAAATAGCTACCTTCTGGATTGAATCTGATAAGCTGAAAGGAGTTCTTCTTGAAAGTGGGAACCCTGAGGAATTTCAACTCTTGCCCAAACTTGCCAGAAGTCAACCTTTGATTGATAAAGCCAAACTTGAAAACGCAACTTCAGTGGAGGAGGCACTAGAGATTGCTCGGGCATCCTTGCAAGGCCAAGTCGCTGCCTAA 1557 0.4502 MPSPSGTQPLAQEYLIALHCHFLTVFCFTARRLIMAAISNSFSLKHGFYLARPQNPFRTPVLPSSTSIKFRRCYAAFANENREYVIVGGGNSAGYAARTFVEHGMADGRLCIVTKEPYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQPPEWYKENGIEMLYEDPVKDIDIEKQTLTTNSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRNVTDADALILSLERAKKVVVVGGGYIGLEVAAAAVGWNLDTTIIFPEDQLLQRLFTPSLSRRYEELYQKNGVKILKGASIKKLDAGSNGHVASVKLGDGSIVEADTVIIGIGAKPAVSPFERVGLNTDVGGIQVDGLFRTSIPGIFAVGDVAAFPLKIYNRISRVEHVDHARRSAQHCVKALLTAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVQIGNFDPKIATFWIESDKLKGVLLESGNPEEFQLLPKLARSQPLIDKAKLENATSVEEALEIARASLQGQVAA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01067 518 PRINTS Pyridine nucleotide disulphide reductase class-I signature 367 374 - -
Spst3g01067 518 PRINTS Pyridine nucleotide disulphide reductase class-I signature 239 264 - -
Spst3g01067 518 PRINTS Pyridine nucleotide disulphide reductase class-I signature 83 105 - -
Spst3g01067 518 PRINTS Pyridine nucleotide disulphide reductase class-I signature 327 341 - -
Spst3g01067 518 PANTHER APOPTOSIS-INDUCING FACTOR 1 82 503 - -
Spst3g01067 518 Pfam Pyridine nucleotide-disulphide oxidoreductase 84 397 IPR023753 GO:0016491
Spst3g01067 518 Gene3D - 207 334 IPR036188 -
Spst3g01067 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Spst3g01067 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 326 342 - -
Spst3g01067 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 352 374 - -
Spst3g01067 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 85 104 - -
Spst3g01067 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 239 257 - -
Spst3g01067 518 Gene3D - 85 400 IPR036188 -
Spst3g01067 518 Gene3D - 417 503 IPR016156 GO:0016491|GO:0050660
Spst3g01067 518 SUPERFAMILY FAD/NAD(P)-binding domain 78 404 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01067 Spst-Chr3 14026547 14045434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01067 190 416 Acyl Lipid Metabolism Gene Families AT1G48030 27.801 3.01e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01067 K08232 - gmx:100819919 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01067 3 14026547 14045434 Spst3g01067 3 14026547 14045434 ECH